Gene Shewmr4_2595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2595 
Symbol 
ID4253166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3090053 
End bp3091210 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content53% 
IMG OID638119230 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_734723 
Protein GI113970930 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000133331 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTTA ATTTCAACGA AGACCAACGC CAATTTGCCG AGCTGGCTCG CCAGTTTGCG 
GCGGATGAAC TCGCCCCCTT TGCTGCCAAA TGGGACGAAG AACATCATTT CCCTAAGGAT
GTGATCCAAA AAGCCGGTGA GCTGGGTTTC TGCTCCCTGT ATTCCCCCGA GTTGGAAGGC
GGTATGGGGC TGTCGCGCTT AGATGCCTCG ATTATTTTCG AAGAGCTATC GAAAGGCTGT
ACTGCCACCA CCGCCATGCT GACAATTCAC AATATGGCCA CTTGGATGGT CACCACTTGG
GGCACTGAGA CACTGCGTCA AGCTTGGTCA GAGCCTTTGA CCACGGGCCA AATGCTCGCC
TCTTATTGCT TAACTGAGCC CGGTGCGGGC TCGGATGCGG CTTCACTGCA AACCAAAGCG
GTGCGTGAAG GTGATGAATA CGTGGTCTCT GGCTCTAAGA TGTTTATCTC GGGCGCAGGT
TCAACTGAGC TTTTAGTCGT AATGTGCCGC ACGGGTCAAC CCGGGCCAAA GGGTATTTCG
GCGATTGCTA TCCCTGCCGA CAGTGAGGGC ATTATCTATG GCAAGGCCGA AGATAAGATG
GGCTGGAACG CGCAGCCGAC GCGCTTAGTT ACCTTCGATA ACGTGCGTGT ACCCGTTGCG
AACCTGCTCG GCGAAGAAGG CCAAGGCTTT ACCTTTGCGA TGAAAGGCTT AGACGGTGGC
CGCATCAATA TCGCCACTTG CTCTGTCGGT ACGGCGCAGG CGGCTTTAGA GCGTGCAACT
CAGTACATGA ATGAGCGTCA GCAATTTGGT AAACCGCTGG CAGCCTTCCA AGCATTGCAA
TTTAAGCTTG CCGATATGGC GACCGAATTA GTGGCTGCGC GGCAAATGGT GCGTTTGGCC
GCCTTTAAAC TCGACAGTGG CGACCCAGAA GCTACCGCCT ATTGCGCGAT GGCGAAGCGT
TTTGCCACCG ATGTGGGCTT CCAAGTTTGT GATGCCGCGC TGCAAATTCA TGGTGGATAT
GGTTATATCA GGGAGTACCC CTTAGAGCGT CACTTCCGTG ATGTGCGTGT ACATCAGATT
TTAGAGGGCA CTAACGAGAT TATGCGCCTC ATTATCGCCC GTCGTTTACT CGACGAAAAT
GCCGGACAAA TCCTCTAA
 
Protein sequence
MDFNFNEDQR QFAELARQFA ADELAPFAAK WDEEHHFPKD VIQKAGELGF CSLYSPELEG 
GMGLSRLDAS IIFEELSKGC TATTAMLTIH NMATWMVTTW GTETLRQAWS EPLTTGQMLA
SYCLTEPGAG SDAASLQTKA VREGDEYVVS GSKMFISGAG STELLVVMCR TGQPGPKGIS
AIAIPADSEG IIYGKAEDKM GWNAQPTRLV TFDNVRVPVA NLLGEEGQGF TFAMKGLDGG
RINIATCSVG TAQAALERAT QYMNERQQFG KPLAAFQALQ FKLADMATEL VAARQMVRLA
AFKLDSGDPE ATAYCAMAKR FATDVGFQVC DAALQIHGGY GYIREYPLER HFRDVRVHQI
LEGTNEIMRL IIARRLLDEN AGQIL