| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3069 |
|---|
| Symbol | |
|---|
| ID | 9157240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3183052 |
|---|
| End bp | 3184215 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003648000 |
|---|
| Protein GI | 296140757 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.117634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTATC CCGTATTGAC CGGCGACGAC CGCGCCGTCG TCGACATGGC GCGTGATTTC
GCGCGCAAAC GCCTCGCGCC GTACGCACTC GAATGGGATG CCACCAAGCA CTTCCCCGTC
GAGGAGATGA AGGAGGCGGG CAGCCTGGGG ATGGCCGCCA TCTACACCCG CGAGGACGTG
GGCGGTTCCG GGCTACGTCG CCTCGACGGT GTGCGCATCT TCGAGGAGCT GGCCAAGGGC
GACCCCGTGA CCGCCGCCTT CCTCTCGATC CACAACATGT GCACCTGGAT GGTGGACACC
TACGGTTCGC AGGAGCAGCG GCAGGAGTGG ATCCCGAAGC TCGCGCCGAT GGACATCATG
GCCAGCTACT GCCTCACCGA GCCGGGCGCC GGATCGGATG CGGCCTCGCT GACCACCAAA
GCCGAGCGCG ACGGCGACGA CTTCGTGCTC AATGGCACCA AGCAGTTCAT CTCGGGTGGT
GGAGCCTCCG ACCTGTACGT GGTCATGGCC CGGAGCGAGG GCGAGGGCGC CCGGGGCATC
TCGACCTTCC TGGTGGACAA GGGAACCCCT GGCCTCTCGT TCGGACCCGC CGAGGTGAAG
ATGGGCTGGC ACAGCCAGCC CACCACGCAG GTGATCTTCG AGAACGTGCG CATTCCCGCC
AGCCGCATGC TCGGCGGGCC CGAGGGCGCA GGCAAGGGTT TCGGCATCGC CATGAACGGG
CTCAACGGCG GACGCCTCAA CATCGCCGCC TGCTCGATGG GTGGCGCGCA GGCCGCGTAC
GATCTGGCGC TGCAGTACAT GACCGAGCGG GAGACATTCG GCCGCAAGCT GATCGACGAG
CCGACGATTC GTTTCACGCT GGCTGATATG GCCACCTCAC TGGAGGCCGC GCGGCTGATC
CTGTGGCGCG CGGCCACGGC CCTCGACGAG AACGACCCCG ACAAGGTCGA GCTCTGCGCG
ATGGCCAAGA AGTTCGTCAC CGAGACCTGT TTCCAGGTGG CCGATCAGGC GCTGCAACTG
CACGGCGGGT ACGGCTACCT GCACGAGACC GGGGTCGAGA AGATCGTCCG CGATCTGCGG
GTGAACCGGA TCCTGGAGGG CACCAACGAG ATCATGCGGA TGGTGATCGG CCGCGCCGAG
GCCGCCCGCA TTCAGGGCAA GTAG
|
|---|
| Protein sequence | MPYPVLTGDD RAVVDMARDF ARKRLAPYAL EWDATKHFPV EEMKEAGSLG MAAIYTREDV
GGSGLRRLDG VRIFEELAKG DPVTAAFLSI HNMCTWMVDT YGSQEQRQEW IPKLAPMDIM
ASYCLTEPGA GSDAASLTTK AERDGDDFVL NGTKQFISGG GASDLYVVMA RSEGEGARGI
STFLVDKGTP GLSFGPAEVK MGWHSQPTTQ VIFENVRIPA SRMLGGPEGA GKGFGIAMNG
LNGGRLNIAA CSMGGAQAAY DLALQYMTER ETFGRKLIDE PTIRFTLADM ATSLEAARLI
LWRAATALDE NDPDKVELCA MAKKFVTETC FQVADQALQL HGGYGYLHET GVEKIVRDLR
VNRILEGTNE IMRMVIGRAE AARIQGK
|
|---|
| |