Gene Mmar10_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1546 
Symbol 
ID4286072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1694604 
End bp1695740 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content62% 
IMG OID638141033 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_756776 
Protein GI114570096 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.295515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTTCG CTCTCACAGA AGATCAGACC CTGATCCGCG ACATGGCGAG AAAATTCGCC 
GACGACCGCT TGAAGCCCAA TGCGGCCAAA TGGGACGAGG AAAAATACTT CCCCGTCGAG
GTGATGCGCG AAGCCGCCGA GCTCGGATTC GCCGGCATCT ATACGCGCGA TGACGTCGGC
GGTTCCGCCC TGTCGCGCCT TGATGCCGCG ATCATCTTTG AAGAGCTGTC GCGCGGCTGT
GTGCCGACGG CGGCCTTCCT GTCGATCCAC AATATGTGTG CCTGGATGAT CGATAGCTGG
GGCACTGAAG AACAGCGCCA GCGCTTCCTG CCCGGCATGA TGACGATGGA AAAGATCGCC
TCCTATTGCC TGACCGAGCC GGGCGCCGGG TCGGACGCGG CCCAGCTGCG CACGAAAGCT
GTGCGTGACG GCGATGATTA TGTGCTCAAC GGCGCCAAGG CCTTCATTTC GGGTGCCGGC
ACGTCGGATT ATTATGTCGT CATGTGCCGC ACCGGCGGTG ACGGTCCCAA GGGCATCTCG
ACCATCGTGG TCGAGAAGGA CACGCCGGGC CTCTCCTTTG GAGCGAACGA GCGGAAAATG
GGTTGGAATG CCCAGCCGAC CCGCGTTGTC ACCTTCGAGG ACTGCCGCGT GCCCGCCGCC
AATCTGCTGG CGGAAGAGGG CATGGGCTTC ACCCTCGCCA TGAAGGGCCT CAATGGTGGC
CGCATCAATA TCGGCGCCTG CTCGCTGGGC GGCGCCACCG AGGCTTTCGA GCTGGCGAAA
GACTATGTCG GCACGCGCAA GCAGTTCGGC CGCGAGATCG GACAGTTCCA GGTCACCCAG
TTCAAGCTGG CCGACATGGC CACCGAGCTC GAAGCCTCCC GCATGATGCT CTATCGCGGC
GCCGCCGCCA TCGATGCCGG CGACCCGTCG GCTGCCAAGT ATTGCGCGAT GGCCAAGCGC
TTCGCCACCG ACACCTGTTT CGACGTCGCC AACCAGGCCC TGCAGCTGCA TGGCGGCTAT
GGCTATCTCC AGGACTACCC GCTCGAACGC ATCGTCCGCG ATCTCCGCGT CCACCAGATC
CTGGAAGGCA CGAATGAGAT CATGCGCGTG ATAATTGCAA AGGATGTGAT GAGGTAG
 
Protein sequence
MDFALTEDQT LIRDMARKFA DDRLKPNAAK WDEEKYFPVE VMREAAELGF AGIYTRDDVG 
GSALSRLDAA IIFEELSRGC VPTAAFLSIH NMCAWMIDSW GTEEQRQRFL PGMMTMEKIA
SYCLTEPGAG SDAAQLRTKA VRDGDDYVLN GAKAFISGAG TSDYYVVMCR TGGDGPKGIS
TIVVEKDTPG LSFGANERKM GWNAQPTRVV TFEDCRVPAA NLLAEEGMGF TLAMKGLNGG
RINIGACSLG GATEAFELAK DYVGTRKQFG REIGQFQVTQ FKLADMATEL EASRMMLYRG
AAAIDAGDPS AAKYCAMAKR FATDTCFDVA NQALQLHGGY GYLQDYPLER IVRDLRVHQI
LEGTNEIMRV IIAKDVMR