| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3937 |
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| Symbol | |
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| ID | 6411618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4225137 |
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| End bp | 4226294 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713818 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001992908 |
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| Protein GI | 192292303 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.818683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAGCCA TTGATCAGTT TTCCCTCAAC GAGGATCAGC GCGCCATCCG CGAGATGGCG
CGCGACTTCG CGGCCGAGAA GATCGCGCCG CACGCGCTGC AATGGGATGA AGACAAGCAC
CTGCCGCTGG ATGTGATCCG GGAAGCGGCG GCGCTGGGCA TCGGCGGCAT CTACATTCGC
GATGACGTCG GCGGCAGCGC GATGAATCGC TTCGACGCGG CGCTGATCTT CGAAGCGCTG
GCGACCGGTT GCCCGTCGGT GTCGGCCTTC ATCTCGATCC ACAACATGGC GGCGTGGATG
ATCGACAGCT ACGGCTCCGA CGCGCAGCGT CAGCACTGGC TGCCGAAGCT GTGCAGCATG
GAGCAGGTCG CCAGCTACTG CCTGACTGAA CCGGGCTCCG GATCGGATGC CGCGGCGCTG
CGCACCCGCG CGGTGCGCGA CGGCGATCAC TACATCCTCA ACGGCCAAAA GCAGTTCATC
TCCGGCGCTG GCGCCAACGA CCTCTATGTC GTGATGGTGC GCACCGGCAG TGACGGTCCC
GGCGGCATCT CGACGCTGGT GGTCGAGAAG GACACGCCGG GCCTCTCGTT CGGTGCCAAC
GAGCGCAAGA TGGGCTGGAA CGCGCAGCCG ACCCGCACCG TCATTTTCGA GAACGCGCGG
GTGCCGGTGG CCAACCGGCT CGGCGACGAA GGCATCGGTT TCAAGATCGC GATGGCCGGG
CTCGACGGCG GCCGGCTCAA CATCGGCGCC TGCTCGCTCG GTGGTGCCCA GGCGGCGCTC
GACAAGACGC TGGCCTACAT GAAGGAGCGC AAGGCGTTCG GGAAGCGTCT CGACGAATTC
CAGGCGCTGC AATTCCGGCT CGCCGACATG GCGACCGAAT TGGAGGCCGC GCGGACGCTG
CTGTGGCGCG CCGCCGCGGC GCTCGACCGC AAGGATGCCG ATGCCACCAA GCTGTGCGCG
ATGGCCAAGC GCTTCGCCAC CGATGCCGGC TTTGGCGTCG CCAACGAGGC GCTGCAGCTA
CACGGCGGCT ACGGCTATCT CGCCGAATAC GGCATCGAAA AGATCGTGCG GGATCTGCGC
GTGCACCAGA TCCTCGAAGG CACCAACGAA ATCATGCGGC TGATCGTGTC GCGCAAGCTG
CTCGAGGCCA ATCGATGA
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| Protein sequence | MTAIDQFSLN EDQRAIREMA RDFAAEKIAP HALQWDEDKH LPLDVIREAA ALGIGGIYIR
DDVGGSAMNR FDAALIFEAL ATGCPSVSAF ISIHNMAAWM IDSYGSDAQR QHWLPKLCSM
EQVASYCLTE PGSGSDAAAL RTRAVRDGDH YILNGQKQFI SGAGANDLYV VMVRTGSDGP
GGISTLVVEK DTPGLSFGAN ERKMGWNAQP TRTVIFENAR VPVANRLGDE GIGFKIAMAG
LDGGRLNIGA CSLGGAQAAL DKTLAYMKER KAFGKRLDEF QALQFRLADM ATELEAARTL
LWRAAAALDR KDADATKLCA MAKRFATDAG FGVANEALQL HGGYGYLAEY GIEKIVRDLR
VHQILEGTNE IMRLIVSRKL LEANR
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