Gene Mkms_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1079 
Symbol 
ID4614600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1163016 
End bp1164182 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content68% 
IMG OID639790756 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_937083 
Protein GI119867131 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0773066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCT TTGGCCTCGA CGACGACGAA CGCGTGATCG CCGAGACAGC GGCCGCGTTC 
GCCGAGAAGC GCCTCGCCCC ATACGCATCG GAGTGGGATG AGAGCCACCA CTTCCCTACC
GACGTGTTGC GGGAGGCGGC CGAACTCGGC ATGGCGGCGA TCTACTGCCG TGAGGACGTC
GGCGGCAGCG GGCTGCGGCG CGTCGATGCC GTGCGCATCT TCGAACAGCT GTCCGCGGCC
GACCCGGCCA TCGCGGCGTT CCTGTCGATC CACAACATGT GCGCATGGAT GGTCGACACC
TACGGCTCCG AGGAGCAGCG CAAGACGTGG GTGCCGCGGC TGGCGTCGAT GGAGAGCATC
GCGAGCTACT GCCTCACCGA ACCGGGTGCG GGGTCGGACG CGAGTGCGTT GCGCACCAAG
GCCGTTCGGG AGGGCGACCA CTTCGTCCTC GACGGGGTGA AGCAGTTCAT CTCGGGTGCG
GGCAGTTCCG ACGTGTACGT GGTGATGGCC CGCACCGGCA GTGACGGACC GCGCGGCATC
TCGGCGTTCG TGGTCGAGAA GGACACGCCC GGTGTGAGTT TCGGCGCCCA GGAACAGAAG
ATGGGGTGGA ACGCGCAGCC CACGGCGCAG GTCGTGTTCG AGGGCGCCCG GGTGCCGGCC
GAGAACATGC TCGGTGGCAC CGACGCCGAG GGCAGCGGTT TCGGCATCGC GATGAACGGC
CTCAACGGCG GGCGCCTCAA CATCGCCGCC TGCTCGCTGG GCGGTGCGCA GACGGCCTAC
GAGAAGGCGG CCGCCTATCT GGCCGACCGG CAGGCCTTCG GCGCGTCGTT GCTCGACGAG
CCGACCATCC GGTTCACCCT GGCCGATATG GCCACCGCCC TGCAGACGTC GCGCACGTTG
TTGTGGCGGG CGGCCGGCGC ACTCGACGAG AACCACCCGG ACAAGGTGGA GTTGTGCGCG
ATGGCGAAGC GCTATGTCAC GGACGCCTGT TACGAGGTGG CCGATCAGGC GCTCCAATTG
CACGGCGGCT ACGGCTATCT GCGCGAGTAC GGGATCGAGA AGATCGTCCG CGATCTGCGG
GTCCACCGGA TCCTCGAGGG CAGCAACGAG ATCATGCGCG TGGTCATCGG GCGGGCAGCC
GCTGCGAGGG CGCGGACATC GGCTTAA
 
Protein sequence
MDLFGLDDDE RVIAETAAAF AEKRLAPYAS EWDESHHFPT DVLREAAELG MAAIYCREDV 
GGSGLRRVDA VRIFEQLSAA DPAIAAFLSI HNMCAWMVDT YGSEEQRKTW VPRLASMESI
ASYCLTEPGA GSDASALRTK AVREGDHFVL DGVKQFISGA GSSDVYVVMA RTGSDGPRGI
SAFVVEKDTP GVSFGAQEQK MGWNAQPTAQ VVFEGARVPA ENMLGGTDAE GSGFGIAMNG
LNGGRLNIAA CSLGGAQTAY EKAAAYLADR QAFGASLLDE PTIRFTLADM ATALQTSRTL
LWRAAGALDE NHPDKVELCA MAKRYVTDAC YEVADQALQL HGGYGYLREY GIEKIVRDLR
VHRILEGSNE IMRVVIGRAA AARARTSA