Gene Psyc_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0901 
Symbol 
ID3515141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1079865 
End bp1081025 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content49% 
IMG OID637669590 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_264188 
Protein GI71065461 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT CATTAACCGA TGACCAAATT GCCTTTCGCC AAACTGCCAG ACAGTTTGCC 
CAAAAAGAGC TTAAGCCCAA TGCCGCTGAA TGGGATCGCA CCTCGCATTT CCCAATAGAT
GTCATCAAAA AATCAGGCGA GCTTGGATTT TTAGGGTTAT ATGCCAACCC TGAGTATGAT
GGCTTGGGTC TGCCGCGTTT AGATTCTGCC ATGGTTTTTG AAGAGCTAGC ATGGGGTGAT
ACCGCGGTGG CTGCTTATAT GAGTATTCAT AATATGGCAG GCTGGATGAT CGGTGAGTTT
GGTAGCGATG CGTTGTGCAA GAAATATTTG CCCAACATGG TCAGCGGCGA ATGGCTGGGC
AGTTATTGTT TGACGGAACC CAATGCCGGT TCTGATGCTG CATCACTGCG TACCAAAGCT
GATAAGCAAG GCGAGTATTA TGTCCTTAAC GGCGAAAAAA CCTTTATTTC AGGTGCAGGC
TCAACCGATG TATTGGTCGT TATGGCTCGT ACGGGCGGCG CAGGACCAAA GGGGATTTCA
GCATTCGTCG TTGATGCAGA CAGTGCTGGT ATTGAATACG GCAAAAACGA GCATAAAATG
GGCTGGAAGG CCCAGCCAAC ACGGACGATT AGCTTTAAAG ATGTCAAAGT TCCAGTAGAA
AACCTCATCG GCGAAGAAGG TCAAGGTTTC CGTATCGCCA TGAAAGGACT TGATGGTGGC
CGGATTAATA TTGGTATCTG TGCGGTAGGG ACAGCGCAAG CGGCGCTAGA GACAGCGACC
AATTACGTCC AAGAGCGCAG TCAGTTTGGC AGCCCGATTG CCAGCTTACA GTCGGTACAG
TTTAAGCTTG CCGATATGCT GACTCAAACC ATTACCGCAC GGCAAATGCT CTATTTAGCG
GCCAGTAAAG TCGACAATAA TGATGTGCAA GCCTCTACTT ATTGCGCGAT GGCAAAGCGT
TTATCGACGG ATCTTTGTTT TGATGTCGCC AACGAAGCTT TGCAGCTGCA TGGTGGCTAC
GGTTATCTCA ATGAGTATCC GCTTGAGCGT CATGTGCGAG ATTTGCGCGT GCATCAGATT
TTGGAAGGCA CCAATGAGAT TATGCGCGTG ATTGTCTCGC GTCAGCTCTT ACAAGACGAG
GCACTGAGCC AACTGCGTTA A
 
Protein sequence
MDFSLTDDQI AFRQTARQFA QKELKPNAAE WDRTSHFPID VIKKSGELGF LGLYANPEYD 
GLGLPRLDSA MVFEELAWGD TAVAAYMSIH NMAGWMIGEF GSDALCKKYL PNMVSGEWLG
SYCLTEPNAG SDAASLRTKA DKQGEYYVLN GEKTFISGAG STDVLVVMAR TGGAGPKGIS
AFVVDADSAG IEYGKNEHKM GWKAQPTRTI SFKDVKVPVE NLIGEEGQGF RIAMKGLDGG
RINIGICAVG TAQAALETAT NYVQERSQFG SPIASLQSVQ FKLADMLTQT ITARQMLYLA
ASKVDNNDVQ ASTYCAMAKR LSTDLCFDVA NEALQLHGGY GYLNEYPLER HVRDLRVHQI
LEGTNEIMRV IVSRQLLQDE ALSQLR