| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1375 |
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| Symbol | |
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| ID | 5109428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1540246 |
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| End bp | 1541409 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502604 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001186872 |
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| Protein GI | 146306407 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.178062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0980928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTCG AACTCAATGA CGAGCAACGC CTGCTGACCG ACAGTGCCCG CGCCTTTGCC
ACGCGGGAAC TGGCGCCCCA TGCCGCGGAC TGGGACCGCG ACCACCACTT CCCCCTGGAG
GTGATCCGCC GCGCCGCCGA GCAGGGCTAT CTGGCCCTCT ATCTGAAGGA GGAGGACGGC
GGGCTGGGGC TGTCGCGGTT GTCCAGTTCA TTGATCTTCG AACAGCTGGC GGCCGGCTGC
GTAGCCACCA CCGCCTACCT GACCATCCAC AACATGGCCA CCTGGATGCT CGCCAGCTTC
GCCAGTGCCG AGCTCAAGGA CGCCTGGCTA GCGGGCCTGG CCTCCGGCCA GTTGCTCGCC
TCCTACTGCC TGACCGAGCC GGATGCCGGC TCGGACGCCG CCAACCTGCG CACCCGCGCG
CGGCGTGACG GCGACGATTA CGTCATCGAT GGCAGCAAAT GCTTCATCTC CGGCGCGGGC
TCGACCGATG TGCTGATCGT CATGGCGCGC ACCGGCGAGG ACGGCGCCAA GGGCATCTCC
TGCTTCCTGG TGCCGGCCGA TGCCCCCGGC GTACGCTACG GGCGCAACGA GGACAAGATG
GGCTGGAAGG CGCAGCCGAC CCGCACCATC GCCTTCGACG GCGTGCGCAT CCCCGCCAGC
CACCGCATCG GCCCCGAGGG CGAAGGTTTC GTCTACGCCA TGAAGGGCCT CGACGGCGGG
CGTCTGAATA TCGCCAGCTG CTCGCTCGGC GCGGCCCAGG CGGCGCTGCA GCAAAGCCTG
CGCTACGTCG AGGAACGCAA GCAGTTCGGC AAGCCCCTCA GCGAATTCCA GGCGCTGCAG
TTCAAGCTCG CCGACATGCT CACCGACCTC ACCGCCAGCC GGCAGATGGT GCGCCTGGCC
GCGCACAAGC TCGACCGCGG CCACGGTGAG GCCAGCCTCT ACTGCGCCAT GGCCAAGCGC
TTCGCCACCG ATCACTGCTT CAGCGTCTGC AACGAAGCCC TGCAACTGCA CGGCGGCTAC
GGCTATCTGA ATGACTATCC ACTGGAACGC TGGGTACGCG ATGCCCGTGT ACACCAGATA
CTGGAAGGCA CCAACGAGAT CATGCGGGTG ATCGTCGCGC GCCGCCTGCT GCAGCAGGGC
GGCATGCTCG ATCGCCTGCT CTGA
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| Protein sequence | MDFELNDEQR LLTDSARAFA TRELAPHAAD WDRDHHFPLE VIRRAAEQGY LALYLKEEDG
GLGLSRLSSS LIFEQLAAGC VATTAYLTIH NMATWMLASF ASAELKDAWL AGLASGQLLA
SYCLTEPDAG SDAANLRTRA RRDGDDYVID GSKCFISGAG STDVLIVMAR TGEDGAKGIS
CFLVPADAPG VRYGRNEDKM GWKAQPTRTI AFDGVRIPAS HRIGPEGEGF VYAMKGLDGG
RLNIASCSLG AAQAALQQSL RYVEERKQFG KPLSEFQALQ FKLADMLTDL TASRQMVRLA
AHKLDRGHGE ASLYCAMAKR FATDHCFSVC NEALQLHGGY GYLNDYPLER WVRDARVHQI
LEGTNEIMRV IVARRLLQQG GMLDRLL
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