More than 300 homologs were found in PanDaTox collection
for query gene Krad_0387 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_0387  binding-protein-dependent transport systems inner membrane component  100 
 
 
288 aa  561  1.0000000000000001e-159  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.652217  normal  0.014657 
 
 
-
 
NC_008541  Arth_3467  binding-protein-dependent transport systems inner membrane component  65.71 
 
 
296 aa  338  7e-92  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6902  binding-protein-dependent transport systems inner membrane component  55.09 
 
 
271 aa  292  4e-78  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0156181  normal  0.0353896 
 
 
-
 
NC_014211  Ndas_4928  binding-protein-dependent transport systems inner membrane component  58.56 
 
 
302 aa  283  3.0000000000000004e-75  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.346938  normal 
 
 
-
 
NC_013131  Caci_2609  binding-protein-dependent transport systems inner membrane component  48.35 
 
 
272 aa  251  9.000000000000001e-66  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.139734  normal 
 
 
-
 
NC_013131  Caci_3597  binding-protein-dependent transport systems inner membrane component  48.35 
 
 
276 aa  251  1e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.265711  normal 
 
 
-
 
NC_013172  Bfae_01830  carbohydrate ABC transporter membrane protein  51.84 
 
 
272 aa  245  6e-64  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011371  Rleg2_6574  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
276 aa  157  1e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.315492  normal  0.863865 
 
 
-
 
NC_011988  Avi_5400  ABC transporter membrane spanning protein (sugar)  35.06 
 
 
275 aa  158  1e-37  Agrobacterium vitis S4  Bacteria  normal  0.853181  n/a   
 
 
-
 
NC_012852  Rleg_6158  binding-protein-dependent transport systems inner membrane component  33.95 
 
 
275 aa  154  1e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  decreased coverage  0.0000333491 
 
 
-
 
NC_014210  Ndas_3334  binding-protein-dependent transport systems inner membrane component  32.63 
 
 
299 aa  154  2e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0589  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
283 aa  153  2.9999999999999998e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.288724  normal 
 
 
-
 
NC_004310  BR0237  sugar ABC transporter, permease protein  34.23 
 
 
291 aa  152  5.9999999999999996e-36  Brucella suis 1330  Bacteria  normal  0.963709  n/a   
 
 
-
 
NC_009505  BOV_0230  sugar ABC transporter, permease protein  34.23 
 
 
291 aa  152  5.9999999999999996e-36  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1500  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
293 aa  152  8e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.347509  normal  0.943286 
 
 
-
 
NC_013521  Sked_02950  carbohydrate ABC transporter membrane protein  32.21 
 
 
297 aa  152  8e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4914  binding-protein-dependent transport systems inner membrane component  32.84 
 
 
275 aa  152  8e-36  Sinorhizobium medicae WSM419  Bacteria  normal  0.621423  normal  0.856041 
 
 
-
 
NC_009636  Smed_0188  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
277 aa  152  8e-36  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1089  binding-protein-dependent transporter inner membrane component  35.43 
 
 
298 aa  150  3e-35  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0183052 
 
 
-
 
NC_009667  Oant_0311  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
292 aa  148  8e-35  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.466995  n/a   
 
 
-
 
NC_009050  Rsph17029_3407  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
277 aa  148  1.0000000000000001e-34  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.353789  normal  0.790416 
 
 
-
 
NC_011830  Dhaf_2632  binding-protein-dependent transport systems inner membrane component  36.12 
 
 
281 aa  147  1.0000000000000001e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3672  ABC sugar transporter, inner membrane subunit  33.98 
 
 
277 aa  147  2.0000000000000003e-34  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.191343  n/a   
 
 
-
 
NC_013093  Amir_1845  binding-protein-dependent transport systems inner membrane component  35.6 
 
 
295 aa  147  2.0000000000000003e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352716  n/a   
 
 
-
 
NC_011899  Hore_19780  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
253 aa  146  3e-34  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_00800  binding-protein-dependent transport systems inner membrane component  38.1 
 
 
280 aa  146  3e-34  Halothermothrix orenii H 168  Bacteria  normal  0.303025  n/a   
 
 
-
 
NC_013946  Mrub_2088  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
282 aa  146  4.0000000000000006e-34  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.00655693  normal  0.897951 
 
 
-
 
NC_011894  Mnod_5669  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
275 aa  146  5e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2524  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
281 aa  145  1e-33  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0029  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
283 aa  144  2e-33  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000511748  n/a   
 
 
-
 
NC_009620  Smed_4977  binding-protein-dependent transport systems inner membrane component  32.12 
 
 
288 aa  144  2e-33  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0547171 
 
 
-
 
NC_007802  Jann_4088  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
275 aa  143  4e-33  Jannaschia sp. CCS1  Bacteria  normal  normal  0.350213 
 
 
-
 
NC_008541  Arth_3685  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
299 aa  142  5e-33  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1418  binding-protein-dependent transport systems inner membrane component  32.68 
 
 
276 aa  142  5e-33  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2681  Monosaccharide-transporting ATPase  38.19 
 
 
278 aa  142  5e-33  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.515759  normal 
 
 
-
 
NC_010483  TRQ2_0972  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
278 aa  142  7e-33  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00136246  n/a   
 
 
-
 
NC_009486  Tpet_0956  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
278 aa  142  7e-33  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4265  binding-protein-dependent transport systems inner membrane component  30.72 
 
 
293 aa  141  9.999999999999999e-33  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3341  putative sugar ABC transporter, permease protein  33.33 
 
 
292 aa  141  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.22127  normal  0.118781 
 
 
-
 
NC_013525  Tter_0399  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
286 aa  141  9.999999999999999e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_4287  binding-protein-dependent transport systems inner membrane component  30.48 
 
 
293 aa  140  1.9999999999999998e-32  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5474  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
280 aa  140  3e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.9066  normal  0.435889 
 
 
-
 
NC_013172  Bfae_25430  carbohydrate ABC transporter membrane protein  33.82 
 
 
275 aa  140  3e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0542318  n/a   
 
 
-
 
NC_012669  Bcav_1507  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
303 aa  140  3e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.659062  normal 
 
 
-
 
NC_012848  Rleg_4709  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
278 aa  138  1e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_4440  binding-protein-dependent transport systems inner membrane component  34.62 
 
 
277 aa  138  1e-31  Paracoccus denitrificans PD1222  Bacteria  normal  0.062682  normal 
 
 
-
 
NC_012848  Rleg_5211  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
281 aa  138  1e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.610418 
 
 
-
 
NC_013202  Hmuk_0942  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
280 aa  137  1e-31  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.41482 
 
 
-
 
NC_009616  Tmel_1818  binding-protein-dependent transport systems inner membrane component  33.08 
 
 
279 aa  137  1e-31  Thermosipho melanesiensis BI429  Bacteria  normal  0.675174  n/a   
 
 
-
 
NC_012669  Bcav_2601  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
275 aa  138  1e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.260696  normal 
 
 
-
 
NC_007760  Adeh_4134  ABC sugar transporter, inner membrane subunit  31.11 
 
 
295 aa  137  2e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0646  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
301 aa  137  2e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2192  putative sugar ABC transporter, permease protein  32.21 
 
 
283 aa  137  2e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0395  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
277 aa  137  2e-31  Thermoanaerobacter sp. X514  Bacteria  normal  0.230637  n/a   
 
 
-
 
NC_011729  PCC7424_1897  binding-protein-dependent transport systems inner membrane component  32.63 
 
 
291 aa  137  2e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.3984100000000001e-18 
 
 
-
 
NC_011661  Dtur_1741  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
281 aa  136  4e-31  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0067  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
282 aa  136  4e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3555  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
279 aa  136  5e-31  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0352  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
277 aa  135  6.0000000000000005e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1103  binding-protein-dependent transporter inner membrane component  31.58 
 
 
283 aa  135  7.000000000000001e-31  Thermobispora bispora DSM 43833  Bacteria  normal  0.216355  normal  0.105298 
 
 
-
 
NC_008243  Meso_4515  binding-protein-dependent transport systems inner membrane component  31.89 
 
 
275 aa  135  7.000000000000001e-31  Chelativorans sp. BNC1  Bacteria  normal  0.275064  n/a   
 
 
-
 
NC_013093  Amir_0809  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
281 aa  135  7.000000000000001e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2303  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
275 aa  135  9e-31  Chelativorans sp. BNC1  Bacteria  normal  0.313337  n/a   
 
 
-
 
NC_013159  Svir_11600  carbohydrate ABC transporter membrane protein  30.47 
 
 
283 aa  134  9.999999999999999e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3773  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
279 aa  134  9.999999999999999e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.468941  normal 
 
 
-
 
NC_014158  Tpau_1201  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
277 aa  134  1.9999999999999998e-30  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_3142  sugar ABC transporter  33.57 
 
 
275 aa  134  1.9999999999999998e-30  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.367291  normal 
 
 
-
 
NC_013947  Snas_1043  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
273 aa  134  1.9999999999999998e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  decreased coverage  0.00118636  normal  0.712976 
 
 
-
 
NC_004311  BRA0306  sugar ABC transporter, permease protein  32.96 
 
 
275 aa  133  3e-30  Brucella suis 1330  Bacteria  normal  0.147324  n/a   
 
 
-
 
NC_010483  TRQ2_0669  binding-protein-dependent transport systems inner membrane component  32.16 
 
 
283 aa  133  3e-30  Thermotoga sp. RQ2  Bacteria  normal  0.586722  n/a   
 
 
-
 
NC_009654  Mmwyl1_2764  binding-protein-dependent transport systems inner membrane component  31.03 
 
 
275 aa  133  3e-30  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4615  binding-protein-dependent transport systems inner membrane component  31.9 
 
 
295 aa  133  3.9999999999999996e-30  Frankia sp. EAN1pec  Bacteria  normal  0.60944  normal 
 
 
-
 
NC_013515  Smon_1044  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
277 aa  133  3.9999999999999996e-30  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_2542  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
275 aa  132  5e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.607728  normal 
 
 
-
 
NC_012669  Bcav_3791  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
300 aa  132  5e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17142  normal 
 
 
-
 
NC_008541  Arth_3322  binding-protein-dependent transport systems inner membrane component  32.65 
 
 
309 aa  132  6e-30  Arthrobacter sp. FB24  Bacteria  normal  0.0903437  n/a   
 
 
-
 
NC_013526  Tter_2293  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
297 aa  132  6.999999999999999e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2280  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
280 aa  132  6.999999999999999e-30  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.326107  normal 
 
 
-
 
NC_009654  Mmwyl1_0023  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
277 aa  132  6.999999999999999e-30  Marinomonas sp. MWYL1  Bacteria  normal  0.275556  normal  0.424969 
 
 
-
 
NC_012858  Rleg_6792  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
285 aa  132  7.999999999999999e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3981  binding-protein-dependent transport systems inner membrane component  33.97 
 
 
274 aa  132  7.999999999999999e-30  Conexibacter woesei DSM 14684  Bacteria  normal  0.270796  normal 
 
 
-
 
NC_009338  Mflv_3853  binding-protein-dependent transport systems inner membrane component  33.96 
 
 
275 aa  132  9e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0623628 
 
 
-
 
NC_013739  Cwoe_0173  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
311 aa  130  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  34.72 
 
 
285 aa  130  2.0000000000000002e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_011886  Achl_2899  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
316 aa  130  2.0000000000000002e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011369  Rleg2_3667  binding-protein-dependent transport systems inner membrane component  28.86 
 
 
296 aa  131  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0644  binding-protein-dependent transport systems inner membrane component  31.45 
 
 
283 aa  131  2.0000000000000002e-29  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000450076  n/a   
 
 
-
 
NC_013159  Svir_16640  ABC-type sugar transport system, permease component  33.19 
 
 
266 aa  130  3e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.961926  normal 
 
 
-
 
NC_013159  Svir_06510  carbohydrate ABC transporter membrane protein  32.47 
 
 
282 aa  130  3e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2678  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
289 aa  130  3e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4423  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
279 aa  129  5.0000000000000004e-29  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.389703 
 
 
-
 
NC_010717  PXO_00882  L-arabinose transport system permease protein AraQ  36.23 
 
 
278 aa  129  5.0000000000000004e-29  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0407955  n/a   
 
 
-
 
NC_013517  Sterm_4035  binding-protein-dependent transport systems inner membrane component  27.34 
 
 
275 aa  129  5.0000000000000004e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0061  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
297 aa  129  5.0000000000000004e-29  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0952  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
271 aa  129  6e-29  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0350  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
297 aa  129  6e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2422  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
277 aa  129  6e-29  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.161716 
 
 
-
 
NC_009636  Smed_2948  binding-protein-dependent transport systems inner membrane component  35.24 
 
 
282 aa  129  6e-29  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_27720  ABC-type sugar transport system, permease component  34.53 
 
 
284 aa  129  7.000000000000001e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  0.333543  n/a   
 
 
-
 
NC_012858  Rleg_6763  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
276 aa  129  8.000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.18605  normal 
 
 
-
 
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