| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5400 |
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| Symbol | |
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| ID | 7381503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 401257 |
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| End bp | 402084 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649011 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002547248 |
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| Protein GI | 222106457 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.853181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA CAGTTCGTAA CCGCCTGATG CTTGCCATCG CCCTCGTCAT GGCGGCGATC
TATCTCTTCC CGCTCTACTG GATGTATGTC ACGGCACTGA AAACCGGCTC GGCGATGTTT
GCCACCCCGC CGCATTTCTG GCCTGACGAT CCGCAATGGG GCGTCTATAG CGATGTCTGG
CAAAGCCGAA ATATGGGCCG ATATCTGTGG AATTCGACCG TGATCGCCCT GGGTTCGGTC
AGCATTATCT GCGTTCTCGG CACCGGCTGC GCCTATGTGC TGGCGCGCTA TCGCAATGGC
TGGGTCGATG CCGGGCTGTT CCTGATCCTG ATGCTCCAGG TTCTTCCGGC ATCGCTGATG
ATTACCCCGA TCTTCGTCGG CTTTTCGCAG CTTGGCCTGC TGAATACGCC GCGCTTTGCC
GTGATGCTGG CGGTGGCGGC GAAAAGCATG CCGTTCTTCG TGGTTCTGGT GCGTTCCAGC
TTCATGACGG TGCCGATCGA GCTGGAGGAA GCAGCCATGG TCGATGGCAA TTCGAGGATC
GGGGCGTTTT TCAGCATCGT CCTGCCGCTG GCCCGCAATG GCATTCTCGT CAGCGCCATC
CTGATCTTCA TGCAAGCCTT TGGCGAATTC GTCTATTCCA AATCAATGAT CCAATCGGTG
GACCTGCAAC CGGCCAGCGT CGGGCTGAAC AGTTTCATGG GCCCCAATAC CAATGAATGG
AACGGGATCA TGGCCTATGC CTCGATCTAT GTGACGCCGA TCCTCGCCAT TTTCGTTCTT
TTACAGCGCC GCATCGTCTC CGGCCTCACT TCGGGAGCCC TGAAATGA
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| Protein sequence | MSETVRNRLM LAIALVMAAI YLFPLYWMYV TALKTGSAMF ATPPHFWPDD PQWGVYSDVW
QSRNMGRYLW NSTVIALGSV SIICVLGTGC AYVLARYRNG WVDAGLFLIL MLQVLPASLM
ITPIFVGFSQ LGLLNTPRFA VMLAVAAKSM PFFVVLVRSS FMTVPIELEE AAMVDGNSRI
GAFFSIVLPL ARNGILVSAI LIFMQAFGEF VYSKSMIQSV DLQPASVGLN SFMGPNTNEW
NGIMAYASIY VTPILAIFVL LQRRIVSGLT SGALK
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