Gene Rleg_6158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6158 
Symbol 
ID8016171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp204721 
End bp205548 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content60% 
IMG OID644827464 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002978664 
Protein GI241258780 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000333491 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATTACGA CGAACCGCGA CCGACTGATG CTCGCTATAT CGATCGTCAT GGCGGCGATC 
TATCTGTTCC CGCTCTACTG GATGTACATC ACCGCGCTGA AAAGCGGCTC GGAAATGTTC
GCGACGCCGC CGAGCTTCTG GCCGGCCTCG CCGCAATGGG GCACCTATGC CGCGGTCTGG
GAAAGCCGCG ACATGGGCCG TTATCTCTGG AACTCGCTGG TCATCGCGCT CGGCTCCGTG
GCGCTGATCA CCCTGCTCGG CGTCGGCTGC GCCTATGTGC TTGCCAGATA CCGCAATGTC
TGGGTGGATA TCGGTCTCTT TCTCATCCTC ATGCTGCAGG TTCTGCCGGC CTCGCTGATG
ATCACGCCGA TCTTCGTCGG CTTTTCGCAG ATCGGTATGC TGAATTATCC ACGCCTTGCC
GTCATCATCG CGGTCGCGGC AAAGAGCATG CCCTTCTTCG TCATTCTGGT GCGCGCCACC
TTCATGAGCG TTCCCCAGGA GCTGGAGGAG GCGGCTCTCG TCGACGGCAA TTCGCGCGTC
GGCGCCTTCT TCAACATCGT GCTGCCGCTT GCCCGCAACG GCATCCTGGT CAGCGCCATC
CTGATCTTCA TGCAGGCCTT CGGCGAATTC GTCTATTCGA AGTCGATGAT CCAGGCGGTC
GACCTTCAGC CGGCAAGCGT CGGCCTCAAT TCCTTCATGG GGCCGAACAC CAACGAGTGG
AACAACATCA TGGCCTACGC CACGATGTAT GTGACGCCGA TCCTTGCCAT CTTCGTTCTC
TTGCAGCGCC GCATCGTATC CGGCCTCACC TCTGGAGCCC TCAAATGA
 
Protein sequence
MITTNRDRLM LAISIVMAAI YLFPLYWMYI TALKSGSEMF ATPPSFWPAS PQWGTYAAVW 
ESRDMGRYLW NSLVIALGSV ALITLLGVGC AYVLARYRNV WVDIGLFLIL MLQVLPASLM
ITPIFVGFSQ IGMLNYPRLA VIIAVAAKSM PFFVILVRAT FMSVPQELEE AALVDGNSRV
GAFFNIVLPL ARNGILVSAI LIFMQAFGEF VYSKSMIQAV DLQPASVGLN SFMGPNTNEW
NNIMAYATMY VTPILAIFVL LQRRIVSGLT SGALK