Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbis_1089 |
Symbol | |
ID | 9167579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobispora bispora DSM 43833 |
Kingdom | Bacteria |
Replicon accession | NC_014165 |
Strand | + |
Start bp | 1236226 |
End bp | 1237122 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | binding-protein-dependent transporter inner membrane component |
Protein accession | YP_003651704 |
Protein GI | 296269072 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0183052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCCCGG GCGTGAGCGC CGACGTGATG ACCCGCCCGC CGCAGGCCGC GCGGGCGGCG ACCTCGCGGG CACGGCGCCG GGCCATGCGG GACCCCGGCC GGGCGCTGCG GCTCTACCTG CCGCTCGCCC TCTACCTCGC CTTCACCCTG GTCCCGTTCT ACTGGATGAT CTGCTTCGCG CTGCGGCCCT CCGGGTCGAC CTCGCTCGTG CCGTGGCCGA TCACGTTCGA GAACTTCGAG ACCGTCTGGA ACGACATCGG CTACGCGGTG TTCTTCAAGA ACAGCGTGAT CGTCGGCGTG TGGTCGCTGC TCGCCACCAC CGTGCTCGCC CTGATGGGCG GCTACGCGCT GGCCCGGTAC CGGTTCCGCG GGCGGACGCT CTTCATGATC GTCCTGCTCT GCAGCCAGTT CATCCCCGGC GCGATGCTGC TCATCCCGCT CTTCTCGATC TTCAAAGGGC TCGGCCTGAT CAACAACCTG TGGAGCCTCA TCATCGCGGA CACGGTGTTC AACCTGCCGC TGTCGATCAT CCTGATGAGC GGCTTCATCA CCGCGGTGCC GTACACGGTG GAGGAGGCCG CGATGGTGGA CGGCTGCACC CGCCTGCGGG CCTTCTTCGC CGTGGTCCTG CCCCAGCTCC GCCCGGGACT GATCGCGGTC GGGTCGTTCG CCTTCATCCA CACCTGGAAC AACTTCCTGT TCGCGCTCAT GTTCATGAGC CGGGAGGACG GGTTCACCAT CCCGGTCGGG CTGAGCTACA CGATCGGGGA GTACAGCGCC GACTTCGGAG CGCTCGCGGC CGGGGGCGTC GTCGCCGCGC TCCCCGTGGT CCTGGTGTTC GCCGTGATCC AGCGCTATCT CGTGCGCGGG ATCAGCGCCG GTGCGGTCAA GGGATGA
|
Protein sequence | MTPGVSADVM TRPPQAARAA TSRARRRAMR DPGRALRLYL PLALYLAFTL VPFYWMICFA LRPSGSTSLV PWPITFENFE TVWNDIGYAV FFKNSVIVGV WSLLATTVLA LMGGYALARY RFRGRTLFMI VLLCSQFIPG AMLLIPLFSI FKGLGLINNL WSLIIADTVF NLPLSIILMS GFITAVPYTV EEAAMVDGCT RLRAFFAVVL PQLRPGLIAV GSFAFIHTWN NFLFALMFMS REDGFTIPVG LSYTIGEYSA DFGALAAGGV VAALPVVLVF AVIQRYLVRG ISAGAVKG
|
| |