| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4914 |
|---|
| Symbol | |
|---|
| ID | 5319126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1424463 |
|---|
| End bp | 1425290 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640776698 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001313630 |
|---|
| Protein GI | 150377034 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.621423 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.856041 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG CTTTCCGCAA CCGCTTGATG CTGGCTGTCG CGTTGGTGCT CGCGGCCATC
TATCTCTTCC CGCTTTACTG GATGTACATC ACCGCGCTGA AGACCGGCTC GGCGATGTTC
GCGACCCCGC CGAAGTTTTG GCCCAGCGAG CCGCAATGGA GCATCTACGC CCATGTCTGG
GAGAGCCGCA ACATGGGCCG GTATCTCTGG AATTCGCTCG TCATCGCCTT CGGCTCCGTG
GCGCTGATCG CCGTGCTCGG CGTCGGATGC GCCTATGTGC TTGCGCGCTA TCGCAATGTC
TGGGTCGATA TCGGCCTGTT TCTAATCCTC ATGCTCCAGG TGCTGCCCGC CTCGCTGATG
GTGACGCCGA TTTTCGTCGG CTTCTCGCAG GTGGGCCTCC TTGACACGCC GCGCCTTGCC
GTCATCCTGG CGATTGCTGC CAAAAGCATG CCCTTTTTCG TGGTTCTTGT CCGCGCTACT
TTCATGAGCG TGCCGATGGA ACTCGAAGAA GCGGCTCTCG TCGACGGCAA TTCACGCATT
GGTGCCTTCT TCAACATCGT GCTGCCGCTC GCCCGCAACG GGATTCTCGT CAGCGCGATC
CTTATCTTCA TGCAAGCCTT CGGCGAATTC GTCTATTCGA AATCGATGAT CCAGGCTGTC
GAGTTGCAGC CCGCAAGCGT TGGCCTGAAT ACCTTCATGG GGCCGAACAC CAATGAATGG
AACAACATCA TGGCCTATGC CACGATCTAT GTGACGCCCA TCCTTGCCGC CTTTATCCTC
TTGCAGCGCC GCATTGTGTC CGGCCTCACT TCAGGAGCCC TCAAATGA
|
|---|
| Protein sequence | MSDAFRNRLM LAVALVLAAI YLFPLYWMYI TALKTGSAMF ATPPKFWPSE PQWSIYAHVW
ESRNMGRYLW NSLVIAFGSV ALIAVLGVGC AYVLARYRNV WVDIGLFLIL MLQVLPASLM
VTPIFVGFSQ VGLLDTPRLA VILAIAAKSM PFFVVLVRAT FMSVPMELEE AALVDGNSRI
GAFFNIVLPL ARNGILVSAI LIFMQAFGEF VYSKSMIQAV ELQPASVGLN TFMGPNTNEW
NNIMAYATIY VTPILAAFIL LQRRIVSGLT SGALK
|
|---|
| |