23 homologs were found in PanDaTox collection
for query gene Jden_2272 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013174  Jden_2272  transcriptional regulator, XRE family  100 
 
 		 68 aa  134  5e-31  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.555397 
 
 
-
 
NC_012669  Bcav_0165  transcriptional regulator, XRE family  55 
 
 		 201 aa  46.2  0.0002  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_2248  transcriptional regulator, XRE family  53.85 
 
 		 505 aa  45.1  0.0003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.99928  n/a   
 
 
-
 
NC_013595  Sros_5143  putative transcriptional regulator, XRE family  41.67 
 
 		 192 aa  44.3  0.0005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0117731  normal  1 
 
 
-
 
NC_008699  Noca_2735  helix-turn-helix domain-containing protein  48.21 
 
 		 104 aa  44.7  0.0005  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_0731  helix-hairpin-helix DNA-binding motif-containing protein  45.83 
 
 		 418 aa  43.1  0.001  Thermobifida fusca YX  Bacteria  decreased coverage  0.00340964  n/a   
 
 
-
 
NC_013159  Svir_28980  predicted transcriptional regulator  45 
 
 		 382 aa  42  0.003  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.645932 
 
 
-
 
NC_013216  Dtox_2259  transcriptional regulator, XRE family  37.25 
 
 		 255 aa  41.6  0.004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.00208232 
 
 
-
 
NC_009438  Sputcn32_3866  XRE family transcriptional regulator  32.31 
 
 		 509 aa  41.2  0.005  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4110  XRE family transcriptional regulator  49.09 
 
 		 212 aa  41.2  0.005  Cupriavidus metallidurans CH34  Bacteria  normal  0.595211  normal  1 
 
 
-
 
NC_008345  Sfri_3903  transcriptional regulator, XRE family protein  36.11 
 
 		 511 aa  40.8  0.006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_0106  XRE family transcriptional regulator  35.14 
 
 		 509 aa  40.8  0.006  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_4059  XRE family transcriptional regulator  34.72 
 
 		 510 aa  40.8  0.006  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_2180  transcriptional regulator, XRE family  47.27 
 
 		 101 aa  40.8  0.006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.165219  n/a   
 
 
-
 
NC_009997  Sbal195_4434  XRE family transcriptional regulator  35.14 
 
 		 509 aa  40.8  0.006  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_4239  transcriptional regulator, XRE family  35.14 
 
 		 510 aa  40.8  0.006  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3944  XRE family transcriptional regulator  34.72 
 
 		 510 aa  40.8  0.006  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_4294  XRE family transcriptional regulator  35.14 
 
 		 510 aa  40.4  0.007  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3851  XRE family transcriptional regulator  34.72 
 
 		 510 aa  40.8  0.007  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_4705  transcriptional regulator, putative  39.06 
 
 		 503 aa  40.4  0.008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010002  Daci_2304  XRE family transcriptional regulator  42.55 
 
 		 131 aa  40.4  0.008  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.0985964 
 
 
-
 
NC_009092  Shew_2560  XRE family transcriptional regulator  35.38 
 
 		 510 aa  40.4  0.008  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_1608  XRE family transcriptional regulator  35.38 
 
 		 510 aa  40  0.009  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.118934 
 
 
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