| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0165 |
|---|
| Symbol | |
|---|
| ID | 7862037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 173165 |
|---|
| End bp | 173770 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643864242 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_002880192 |
|---|
| Protein GI | 229818666 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGGGC GCGACACGTA CAGTCTCACT GAACATGTTC ATCGAAACGA AACATCGCCG
GGGGGACATG TGCTGGGAGA CCGACTGCGG GACCTGCGCC GGCAGCACGG GCTGACGCTC
CGCGACGTCG CCGGCCAGAC CGGGCTGTCC GTGGCGCTCC TCAGTCAGAT CGAGAACGGG
CGCACCGACC CGAGCATCAC GAGCCTGCGC AAGCTCGCCC GGGCGTTCGA CGCCGAGGTG
GCGACGCTCT TCCACGAGCC CGACGCGCCG TCGGTCCACA TCTCCCGACC CGGCGAGCGC
TTCCTTCTCT CCGCGCCCGC GGGGCTCATC GCCTACGAGC GAGTGACGCC GGGCCGCGGC
GACCTCGAGG TCCTGCGTTC GGTCCTCGCG CCCGGCGACG TGAGCGCCGA GGGTCCGCGC
GGGCACGCCT CGACGGAGTG TGTGTACGTC CTCGCGGGGG AGGTCGTCGT GACAATCGGG
GAGAGCGACC ACCGGCTCGT GGCGGGCGAG GCGGCGACGT TCGACTCGCG CCAGCCGCAC
CGCTACCGCA ACGACTCGGC GGCGAACGCC GAGATCCTCG TCGTCGTCAC GCCGCCGACG
CCGTGA
|
|---|
| Protein sequence | MHGRDTYSLT EHVHRNETSP GGHVLGDRLR DLRRQHGLTL RDVAGQTGLS VALLSQIENG
RTDPSITSLR KLARAFDAEV ATLFHEPDAP SVHISRPGER FLLSAPAGLI AYERVTPGRG
DLEVLRSVLA PGDVSAEGPR GHASTECVYV LAGEVVVTIG ESDHRLVAGE AATFDSRQPH
RYRNDSAANA EILVVVTPPT P
|
|---|
| |