| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3851 |
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| Symbol | |
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| ID | 4254414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4598676 |
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| End bp | 4600208 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120496 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_735971 |
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| Protein GI | 113972178 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAATG ACCAGAGCTT GATGAGAAAG TCACATTTCC TAGGGACAAA AATACGTAAC
CTACGGAAAC GTAACAATTT AACCATGGAA GATTTATCTG CGCGTTGCAT CCGCGTCGAT
GCGGGCAGTG CGCCCTCTGT GTCATATTTG TCGATGATCG AGCGTGGAAA ACGCGTGCCG
AGTGCCGAAA TGTTGGCCGT GATTGCCACG GTTTTTCAAA AGGATGTTGA CTGGTTTTTA
GACGACGTAC CTGAGGAAAG TGCCATCACG CCGGACAAGG GCCGCCGAGG TGGGATTAGC
GGCATGGCGC TCGAACCCAG CTTTTTGTTT TCAAATGATA TTTTGCAAAT AGCCATCCCT
GAAATGCTAT CCCAGACTGG GATCTCGGGT CGACAATTCG CCCACTTATT AATCCGCGCC
CATCAGGAAC ATCATCAAAA CCATTTCCCC GATCTTGAAC GTGCCGCCGA AGAGGTTGGG
TTAAAACGCA TGCCCTTATC CCTCGAGGAG ATGCTGGATA TTGCCAAGGG CGTAGGCTTA
AAAATCAAAT GGATAGATAG TACGCCCCAG GAAGTGATCG ACGAGCGCGG CGTAAGCTCG
CATCAGTTAG TGACTTCCTT CTTCGAGCCG CCGAGCACCA TTTACATCAA TAAAGTCCTT
AAAAATCGCC CCAGTCGACT GAAGTACGAT CTCGCCGCCC ATATCGGCCA TTGTGTGTTA
CACAACAAAG ATGGGCTTAA GAGTGTGATG ATTTCTGGCC GAAAACTGGA GATGGATGAA
GAAGTGACGA TGCAGTCTAA TACCCTGAAC GCGCAGGATA TTTTGCATGC GTGGCGCGAC
TTCGAGTCCA GCTTTTTTGC CGGAGCCCTG TTATGTCCTA AGGTGCCCTA TCGACAATTG
CTCGACCGCC ACGGTTACGA AATTGAGGTG CATAAACAGC TGCAAGTGTC GGCTTCGGTT
GCCATGCGAC GGATGACGGT CGTATCGCCT TATTCCCATT GGCATTATTT TGATGCCTAT
GCGCCGGGCA AACTCAAAGC CGTTTACCGT GGTAATGGCA TTCCCCTGCC TTGGGGCAAT
ATGCGGCTGG TGGAAGACCC TTGTCAGCAC TGGGCGGTGT TTAGAATGAT CAGTGAACCT
TCAGTTGGGA CATCGGCGCA AATTTCGATT TTAAATGTGG GCAATGAACC ACGGATTTAC
TGCTGCGAGT CGATTAAGGT CGAAGACTCG GCGGGCAACC CCCATGTGCT TTGTGCCGGT
ATCGATTTAA ATCCGGCCAT TGAAGCCCAA GGTAAGGATG CACTCTCTAT CGCCCATGAT
TTAAAAGCCG CCTGTGTGTC TGGCGGCGGA TCAGTCGCGA TTCCCAAGCA TATTAAAAGC
GATCTAGTAA GCGTGGCTAA GATATTGAAT ATCAACTGGA TTGAGCGCGG TATTAAAAAT
GATGCCCGGC TTATCTGCTC CCGCGGCGCC GTCTGCCCAC GGCAACCCAG CTGTTATCAA
GCGGGTAAAT CGCAGTGTGA TGGGGCAGCG TAA
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| Protein sequence | MRNDQSLMRK SHFLGTKIRN LRKRNNLTME DLSARCIRVD AGSAPSVSYL SMIERGKRVP
SAEMLAVIAT VFQKDVDWFL DDVPEESAIT PDKGRRGGIS GMALEPSFLF SNDILQIAIP
EMLSQTGISG RQFAHLLIRA HQEHHQNHFP DLERAAEEVG LKRMPLSLEE MLDIAKGVGL
KIKWIDSTPQ EVIDERGVSS HQLVTSFFEP PSTIYINKVL KNRPSRLKYD LAAHIGHCVL
HNKDGLKSVM ISGRKLEMDE EVTMQSNTLN AQDILHAWRD FESSFFAGAL LCPKVPYRQL
LDRHGYEIEV HKQLQVSASV AMRRMTVVSP YSHWHYFDAY APGKLKAVYR GNGIPLPWGN
MRLVEDPCQH WAVFRMISEP SVGTSAQISI LNVGNEPRIY CCESIKVEDS AGNPHVLCAG
IDLNPAIEAQ GKDALSIAHD LKAACVSGGG SVAIPKHIKS DLVSVAKILN INWIERGIKN
DARLICSRGA VCPRQPSCYQ AGKSQCDGAA
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