Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4239 |
Symbol | |
ID | 7089180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 5040804 |
End bp | 5042336 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643463113 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_002360128 |
Protein GI | 217975377 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCAATG ACCAGAGCTT GATGAGAAAA TCACACTTCC TAGGGACAAA AATACGTAAC CTACGGAAAC GTAATAACTT AACCATGGAA GATTTGTCGG CACGCTGCAT TCGAGTCGAC GCCGGAAGTG CGCCCTCTGT GTCATATTTG TCGATGATCG AGCGTGGAAA ACGAGTGCCG AGTGCCGGAA TGCTGGCTGT GATCGCCGCC GTTTTTCAAA AAGATGCCGA CTGGTTCCTC GACGATGTGC CCGAAGAGAG CGCTATTACG CCAGATAAAG GCCGACGTGG TGGCATAAGC GGTATGGCGC TCGAACCCAG CTTTTTGTTT TCCAATGATA TTTTGCAAAT CGCGATACCA GAAATGCTGT CGCAGACGGG GATTTCAGGT CGGCAGTTTG CCCATTTATT GATCCGCGCC CATCAAGAAC ACCATCAAAA TCATTTCCCC GATCTTGAAC GTGCCGCTGA AGAAGTCGGT CTCAAGCGTA TGCCCTTATC TCTGGACGAT ATGATGGATA TTGCTAAGGG CATGGGATTA AAAATCAAAT GGATAGATAG CACACCACAG GAAGTGATCG ACGATATGGG CGTGAGTTCA CGCCAGTTAG TCACCTCATT TTTTGAGCCG CCGAGCACGA TTTATGTGAA TAAAATCCTT AAAAATCGTC CTAATAGACT CAAATATGAC TTAGCCGTGC ACATAGGTCA TTGTGTGCTG CACAACAAAG ACGGCCTCAA GAGTGTGATG ACCTCAGGCC GTAAAGAAGA AGTGGACGAA GAAGCAGGTA TGCAGTCCAA TACATTGAAC GCGCAGGATA TTTTGCATGC GTGGCGTGAC TTTGAATCGA GTTTTTTCGC CGGTGCGCTG TTGTGCCCTA AAGTGCCTTA TCGCCAATTA CTCGACCGCC ACGGTTACGA GATTGAAGTA CACAAGCAAC TGCAAGTATC AGCCTCGGTC GCCATGCGGC GCATGACAGT GGTATCTCCT TATCCCCATT GGCATTATTT CGACGCTTAC GCACCGGGCA AGCTCAAGGC GGTTTATCGC GGCAACGGGA TCCCACTGCC TTGGGGCAAT ATGCGACTAG TGGAAGATCC CTGCCAGCAT TGGGCCGTCT TTAGGATGAT CAGCGAGCCA ACGGTCGGCA CTTCGGCACA GATTTCGATT TTAAACGTCG GCAACGAACC ACGCATTTAC TGTTGCGAGT CAATTAAGGT CGAAGATTCG GCGGGTAACC CGCATGTCCT CTGCGCCGGT ATTGATTTAA ATCCGGCGAT TGAAGCCCAA GGCAAAGATG CTCTCTCAAT CGCCCACGAT TTGAAAGATG CCTGTGTCGC CAGCGGCGGT TCAGTCACTA TTCCAAAACA CATTAAAAGC GATCTGGTGA GCGTCGCAAA AATCCTCAAT ATCAACTGGA TAGAGCGCGG GATCAAAAAC GACGCCCGCC TGATTTGCTC CCGCGGCGCC GTGTGTCCAC GCCAACCGAG TTGCTATCAA GCGGGTAAGT CACAGTGTGA TGGAGTAGCG TAA
|
Protein sequence | MRNDQSLMRK SHFLGTKIRN LRKRNNLTME DLSARCIRVD AGSAPSVSYL SMIERGKRVP SAGMLAVIAA VFQKDADWFL DDVPEESAIT PDKGRRGGIS GMALEPSFLF SNDILQIAIP EMLSQTGISG RQFAHLLIRA HQEHHQNHFP DLERAAEEVG LKRMPLSLDD MMDIAKGMGL KIKWIDSTPQ EVIDDMGVSS RQLVTSFFEP PSTIYVNKIL KNRPNRLKYD LAVHIGHCVL HNKDGLKSVM TSGRKEEVDE EAGMQSNTLN AQDILHAWRD FESSFFAGAL LCPKVPYRQL LDRHGYEIEV HKQLQVSASV AMRRMTVVSP YPHWHYFDAY APGKLKAVYR GNGIPLPWGN MRLVEDPCQH WAVFRMISEP TVGTSAQISI LNVGNEPRIY CCESIKVEDS AGNPHVLCAG IDLNPAIEAQ GKDALSIAHD LKDACVASGG SVTIPKHIKS DLVSVAKILN INWIERGIKN DARLICSRGA VCPRQPSCYQ AGKSQCDGVA
|
| |