Gene Sros_5143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5143 
Symbol 
ID8668437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5657393 
End bp5657971 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003340664 
Protein GI271966468 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0117731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGATC TGGCGGCATT GGGGCTGCGC GTGCAGGAGC TCAGGCATCT GCGGGGTCTG 
ACCCTTCAGC AGATGGCGGG CGCAGCCGAC GTCAGCGTGA GCATGCTGTC CTCGGTCGAG
CGCGGCCAGA AGGCGCCGAC CGTGGTCGTA CTCGGCCGCA TCGCCGACGG CCTCGGCGTG
TCCCTCGCCG AACTGGTCGC CGAGCCGGAG GATCGCCGTG TCATCGTGCG CCGCGCCGCC
GATCAGGACA CCGTCGACGA GCCCGGCGGA TGGCACCGTT CGATACTCAC CCCTGTGGTT
CCCGGCGTGA ACTTCGAATG GATCCGCACC ACGCTGCCCC CGGGCTGCGA CGCCGGCCGG
TTTCCGGCCT ACGCTCAGGG CTCGCACGAG TACGTCGTGG TCGAGTCCGG CACGCTCCGG
TTGACCGTCG CGGATCAGAC CGTCGAACTG GGCGAAGGCG ACTCGGCCTA CTTCGCCGCC
GACGCCGAGC ACGGTTACGT CAACCCCGGC CCCGTTCCCT GCGCGTACTA TGTCGCCGCA
CTCATCATGC GCCCGCGCTC CGCCCAGCGA AACCCGTGA
 
Protein sequence
MVDLAALGLR VQELRHLRGL TLQQMAGAAD VSVSMLSSVE RGQKAPTVVV LGRIADGLGV 
SLAELVAEPE DRRVIVRRAA DQDTVDEPGG WHRSILTPVV PGVNFEWIRT TLPPGCDAGR
FPAYAQGSHE YVVVESGTLR LTVADQTVEL GEGDSAYFAA DAEHGYVNPG PVPCAYYVAA
LIMRPRSAQR NP