| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3944 |
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| Symbol | |
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| ID | 4257837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4685918 |
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| End bp | 4687450 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638124633 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_739978 |
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| Protein GI | 114049428 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAATG ACCAGAGCTT GATGAGAAAG TCACATTTCC TAGGGACAAA AATACGTAAC
CTACGGAAAC GTAACAATTT AACCATGGAA GATTTATCGG CACGTTGCAT TCGCGTCGAT
GCGGGCAGTG CGCCCTCTGT GTCATATTTG TCGATGATCG AACGCGGCAA ACGCGTGCCC
AGTGCCGAAA TGTTGGCCGT GATTGCTACG GTTTTTCAAA AGGACGTTGA CTGGTTTTTA
GACGATGTGC CCGAGGAAAG TGCCATCACG CCGGACAAGG GGCGCCGTGG TGGGATCAGC
GGCATGGCGC TCGAACCCAG CTTTTTGTTT TCAAATGATA TTTTGCAAAT AGCCATCCCT
GAAATGCTAT CCCAGACTGG GATCTCGGGT CGGCAATTCG CCCACTTATT AATCCGCGCC
CATCAGGAAC ATCATCAAAA CCATTTCCCC GATCTTGAAC GTGCCGCCGA AGAGGTTGGG
TTAAAACGTA TGCCCTTATC CCTTGAGGAG ATGCTGGATA TTGCCAAGGG CGTTGGCTTA
AAAATCAAAT GGATAGATAG TACGCCCCAG GAAGTGATCG ACGAGCGCGG TGTAAGCTCC
CATCAGTTAG TGACTTCCTT CTTCGAGCCG CCCAGTACAA TTTACATCAA TAAAGTCCTT
AAAAATCGCC CCAGCCGGTT AAAGTACGAT CTCGCCGCCC ATATCGGCCA TTGTGTGTTG
CACAACAAAG ATGGGCTTAA GAGTGTGATG ATTTCTGGCC GAAAACTTGA GATGGACGAA
GAAGTGACGA TGCAGTCTAA TACTCTGAAC GCGCAGGATA TTTTACATGC GTGGCGCGAC
TTTGAGTCCA GCTTTTTTGC CGGAGCCCTG TTATGTCCTA AGGTGCCGTA TCGACAGTTG
CTCGACCGCC ACGGTTACGA AATTGAGGTG CATAAACAGC TGCAAGTGTC GGCTTCGGTC
GCCATGCGGC GGATGACAGT AGTATCGCCT TATCCCCATT GGCATTATTT TGATGCCTAT
GCGCCGGGCA AACTTAAGGC CGTTTACCGT GGCAATGGCA TTCCCCTGCC TTGGGGCAAT
ATGCGGCTGG TGGAAGACCC TTGTCAGCAC TGGGCGGTGT TTAGAATGAT CAGCGAGCCC
AAGGTTGGGA CCTCGGCGCA AATTTCGATT TTAAATGTGG GCAATGAACC ACGGATTTAC
TGCTGCGAGT CGATTAAGGT CGAAGACTCG GCGGGCAACC CCCATGTGCT CTGTGCCGGC
ATCGATTTGA ATCCGGCCAT TGAAGCCCAA GGCAAAGATG CACTCTCTAT CGCCCATGAT
TTAAAAGCCG CCTGTGTCTC TGGCGGCGGC TCAGTCGCAA TTCCCAAGCA TATTAAAAGC
GATCTAGTAA GCGTGGCTAA GATATTGAAT ATCAACTGGA TTGAACGCGG TATTAAAAAT
GATGCCCGGC TTATCTGCTC CCGCGGCGCC GTCTGCCCAC GGCAACCCAG CTGTTATCAA
GCGGGTAAAT CGCAGTGTGA TGGGGCAGCG TAA
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| Protein sequence | MRNDQSLMRK SHFLGTKIRN LRKRNNLTME DLSARCIRVD AGSAPSVSYL SMIERGKRVP
SAEMLAVIAT VFQKDVDWFL DDVPEESAIT PDKGRRGGIS GMALEPSFLF SNDILQIAIP
EMLSQTGISG RQFAHLLIRA HQEHHQNHFP DLERAAEEVG LKRMPLSLEE MLDIAKGVGL
KIKWIDSTPQ EVIDERGVSS HQLVTSFFEP PSTIYINKVL KNRPSRLKYD LAAHIGHCVL
HNKDGLKSVM ISGRKLEMDE EVTMQSNTLN AQDILHAWRD FESSFFAGAL LCPKVPYRQL
LDRHGYEIEV HKQLQVSASV AMRRMTVVSP YPHWHYFDAY APGKLKAVYR GNGIPLPWGN
MRLVEDPCQH WAVFRMISEP KVGTSAQISI LNVGNEPRIY CCESIKVEDS AGNPHVLCAG
IDLNPAIEAQ GKDALSIAHD LKAACVSGGG SVAIPKHIKS DLVSVAKILN INWIERGIKN
DARLICSRGA VCPRQPSCYQ AGKSQCDGAA
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