Gene Shewana3_4059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4059 
Symbol 
ID4480273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4878341 
End bp4879873 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content51% 
IMG OID639728674 
ProductXRE family transcriptional regulator 
Protein accessionYP_871682 
Protein GI117922490 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATG ACCAGAGCTT GATGAGAAAG TCACATTTCC TAGGAACAAA AATACGTAAC 
CTACGGAAAC GTAACAATTT AACCATGGAA GATTTATCGG CACGTTGCAT CCGCGTCGAT
GCGGGCAGTG CGCCCTCTGT GTCATATTTG TCGATGATCG AGCGTGGAAA ACGCGTACCC
AGTGCTGAAA TGTTGGCCGT GATTGCCACG GTTTTTCAAA AGGACGTTGA CTGGTTTTTA
GATGACGTGC CCGAGGAAAG TGCCATCACG CCGGACAAAG GCCGTCGTGG TGGGATTAGC
GGCATGGCGC TCGAACCCAG CTTTTTGTTT TCAAATGATA TTTTGCAAAT AGCCATCCCT
GAAATGCTAT CCCAGACGGG GATTTCGGGT CGACAATTCG CCCACTTATT AATCCGCGCC
CATCAGGAAC ATCATCAAAA CCATTTCCCC GATCTTGAAC GTGCCGCCGA AGAGGTTGGG
TTAAAACGTA TACCCTTATC CCTCGAGGAG ATGCTGGATA TTGCCAAGGG CGTAGGCTTA
AAAATCAAAT GGATAGATAG TACGCCCCAG GAAGTGATCG ACGAGCGCGG CGTAAGCTCG
CATCAGTTAG TGACTTCTTT CTTCGAGCCG CCCAGCACCA TTTACATCAA TAAAGTCCTT
AAACATCGCC CCAGTCGACT GAAGTACGAT CTCGCCGCCC ATATCGGCCA TTGTGTGTTG
CACAACAAGG ATGGGCTTAA GAGTGTGATG ATTTCTGGCC GAAAACTTGA GATGGACGAA
GAAGTGACGA TGCAGTCTAA TACCCTGAAC GCGCAGGATA TTTTGCATGC GTGGCGCGAC
TTTGAGTCCA GCTTTTTTGC CGGAGCCCTG TTATGTCCTA AGGTGCCGTA TCGACAATTG
CTCGACCGCC ACGGTTACGA AATTGAGGTG CATAAACAGC TACAAGTGTC GGCCTCGGTC
GCCATGCGGC GGATGACGGT CGTATCGCCT TATCCCCATT GGCATTATTT TGATGCCTAT
GCGCCGGGCA AACTCAAGGC CGTATACCGT GGCAATGGCA TTCCCCTGCC TTGGGGCAAT
ATGCGGCTGG TGGAAGACCC TTGTCAGCAC TGGGCGGTGT TTAGAATGAT CAGCGAGCCC
AAGGTCGGCA CCTCGGCGCA AATTTCGATT TTAAATGTGG GCAATGAACC ACGGATTTAC
TGCTGCGAGT CGATTAAAGT CGAAGACTCG GCGGGCAACC CCCATGTGCT CTGTGCCGGT
ATCGATTTGA ATCCGGCCAT CGAAGCCCAA GGCAAAGATG CACTCTCTAT CGCCCATGAT
TTAAAAGCCG CCTGTGTCTC TGGCGGCGGC TCAGTCGCGA TTCCCAAGCA TATTAAAAGT
GATCTAGTAA GCGTGGCTAA GATATTGAAT ATCAACTGGA TTGAACGCGG TATTAAAAAT
GATGCCCGGC TTATCTGCTC TCGCGGCGCC GTCTGCCCAC GGCAACCCAG CTGTTATCAA
GCGGGTAAAT CCCAGTGTGG TGGGGTGGAG TAA
 
Protein sequence
MRNDQSLMRK SHFLGTKIRN LRKRNNLTME DLSARCIRVD AGSAPSVSYL SMIERGKRVP 
SAEMLAVIAT VFQKDVDWFL DDVPEESAIT PDKGRRGGIS GMALEPSFLF SNDILQIAIP
EMLSQTGISG RQFAHLLIRA HQEHHQNHFP DLERAAEEVG LKRIPLSLEE MLDIAKGVGL
KIKWIDSTPQ EVIDERGVSS HQLVTSFFEP PSTIYINKVL KHRPSRLKYD LAAHIGHCVL
HNKDGLKSVM ISGRKLEMDE EVTMQSNTLN AQDILHAWRD FESSFFAGAL LCPKVPYRQL
LDRHGYEIEV HKQLQVSASV AMRRMTVVSP YPHWHYFDAY APGKLKAVYR GNGIPLPWGN
MRLVEDPCQH WAVFRMISEP KVGTSAQISI LNVGNEPRIY CCESIKVEDS AGNPHVLCAG
IDLNPAIEAQ GKDALSIAHD LKAACVSGGG SVAIPKHIKS DLVSVAKILN INWIERGIKN
DARLICSRGA VCPRQPSCYQ AGKSQCGGVE