| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28980 |
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| Symbol | |
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| ID | 8388222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3146759 |
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| End bp | 3147907 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644976929 |
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| Product | predicted transcriptional regulator |
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| Protein accession | YP_003134703 |
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| Protein GI | 257056871 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.645932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCA TCGGGGCAAC TATCCGTCGG CTACGACGCT GGCGTGGCCT CACGATCGAG
CAGGCTGCCG GGCTCGCTGG GATCACCAAG GGTTACTTGT CAAAGATCGA AAACGGCCGT
GTGGCAGTCG ATAAACGCAG CACCCTCGTC GCTATCGCGG ACGCGTTGCG GGTGAGCCTT
GTCGACATCA CCGGCGACGG ATTGGAAATC CGTGACCCCG AAGCTGATAG CACCGTGCCG
GCGATCCGCG CTGCTCTGCT TGACAGCGAT TTCGATGACA GCCCGGCGAG AGGTGAGCTG
TCAGCGTTGG TTGCTGAAGC CCAGTTGGTG GCTGCCATGC GGCAGGCCAA TCAGGTGGCT
GAGACCGGTC GTCGCCTGCC ACCGTTGATC ACCGCGTTAC ACACGCATAC GCGGCAGGCT
GAGGCGTTGC GTGCGCTCGT CAGCGTCGCG CACACCACCT CGCTTCTCGT GAAGGGATTA
GGTGCGCCCG ATCTTGCGTG GATCGCCGCT GACCGTGGCC ACGAAGCCGC TGAACGACTC
GGTGATCCGC ACTGGATCGC ACTGGCCGCG TTCGCTCGCA CGCAGGCACA CGCTGGCCTT
GGCGCGCACC GTCGCGCTGG AACGATCGCT CGTAACGCGC TGGAGATCGT GCCCGATGAT
GCGGTCGACG TCCGCGGCGC ACTCACTCTC ACCACTGCAC TCACGGACTC CGTGGTCGGC
AGTGATCCGT CCGCCGCACT CGATGAGGCC GAAGGACTCG TTGCCCACGT CGAGGATGGA
AACCGGCATC ACCTGCTGTT CACCGCGCCG AACGTGGTTC TGTGGCGCAT GGCCACCGCG
CTTGAGCAGG GTGACTATGC GAGAGCCGCC ACACTGGCGG AGTCGATCCA TCCGACCGAG
CTGGAAATCA ACTCGCGGCG TACCACGTAT TTCATCGACT ATGCCCGTGC TCTGTGGGGG
CTGCGACGAC CCGACGAAGA AGTGGTTGCG CTACTGACTC AGGCCGAGAA GCTTGGGCCA
GTGCGCACTC GTAGCAACGC CTTCGTGCGC GAAATCGTGT CCACAATGGT GGAACGTGCG
CGACACCAAG CCGTTGCCCG AGAAGCACGC GGCCTGGCCT CCCGCATGGG TTTGTTGAAG
GCAGGCTGA
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| Protein sequence | MNTIGATIRR LRRWRGLTIE QAAGLAGITK GYLSKIENGR VAVDKRSTLV AIADALRVSL
VDITGDGLEI RDPEADSTVP AIRAALLDSD FDDSPARGEL SALVAEAQLV AAMRQANQVA
ETGRRLPPLI TALHTHTRQA EALRALVSVA HTTSLLVKGL GAPDLAWIAA DRGHEAAERL
GDPHWIALAA FARTQAHAGL GAHRRAGTIA RNALEIVPDD AVDVRGALTL TTALTDSVVG
SDPSAALDEA EGLVAHVEDG NRHHLLFTAP NVVLWRMATA LEQGDYARAA TLAESIHPTE
LEINSRRTTY FIDYARALWG LRRPDEEVVA LLTQAEKLGP VRTRSNAFVR EIVSTMVERA
RHQAVAREAR GLASRMGLLK AG
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