Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4705 |
Symbol | |
ID | 1172284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4907149 |
End bp | 4908660 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637346409 |
Product | transcriptional regulator, putative |
Protein accession | NP_720221 |
Protein GI | 24376177 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGT CACATTTCCT TGGCACCAAA ATACGTAACC TACGGAAACG TAATAATTTA ACCATGGAAG ATTTATCGGC ACGCTGTATC CGCGTCGATG CGAGTAGTGC GCCATCGGTG TCATATTTAT CGATGATCGA GCGTGGTAAG CGCGTGCCCA GTGCCGAAAT GCTGGCCGTG ATTGCGACAG TGTTTCAAAA GGACGTTGAC TGGTTTTTAG ACGATGTGCC CGAAGAGAGT GCCATCACGC CAGACAAAGG CCGCCGTGGT GGGATTAGCG GTATGGCACT CGAACCCAGC TTTTTGTTTT CAAATGATAT TTTGCAAATT GCTATACCAG AAATGTTGTC GCAGACCGGG ATCTCGGGTC GGCAATTTGC CCATTTGTTA ATCCGCGCCC ATCAAGAACA CCATCAAAAC CATTTCCCCG ATCTTGAACG TGCCGCCGAA GAGGTAGGGT TGAAGCGTAT GCCCTTATCC CTCGATGAAA TGCTGGATAT TGCTAAGGGA GTAGGTTTAA AAATCAAGTG GATAGATAGC ACTCCACAGG AAGTGATTGA TGAGCGTGGT GTCAGTTCGC ATCAGTTAGT CACGTCTTTT TTTGAGCCAC CCAGCACGAT TTATATCAAT AAAATGCTTA AAAACCGCCC CAGTCGGCTT AAGTACGATC TCGCCGCCCA TATCGGCCAT TGCGTGTTAC ACAATAAGGA TGGGCTTAAG AGTGTGATGA TCTCCGGCCG TAAATTGCAG ATGGATGAAG AAGTGACAAT GCAATCTAAT ACCCTGAATG CACAGGATAT TTTGCATGCT TGGCGCGACT TCGAATCCAG CTTTTTTGCC GGAGCCCTGT TATGCCCTAA AGTGCCCTAT CGACAATTAC TCGACCGTCA CGGTTACGAA ATTGAGGTGC ATAAACAGCT ACAAGTGTCG GCTTCGGTTG CTATGCGGCG GATGACCGTG GTATCGCCTT ATCCCCATTG GCATTATTTT GATGCCTACG CGCCGGGCAA ACTTAAAGCC GTTTACCGCG GCAACGGTAT TCCCCTGCCT TGGGGCAATA TGCGGCTGGT GGAAGACCCC TGCCAACACT GGGCGGTGTT TAGAATGATC AGTGAGCCTT CAGTTGGGAC ATCAGCGCAG ATTTCGATTT TAAATGTGGG GAATGAACCG CGAATTTATT GCTGCGAATC GATTAAGGTC GAAGATTCGG CGGGCAACCC CCATGTGCTC TGCGCTGGCA TTGATCTCAA TCCGGCCATT GAAGCTCAAG GTAAAGATGC CCTCTCTATC GCCCATGATT TAAAGGCCGC CTGTGTTACT GGCGGCGGCT CAGTGGCGAT TCCTAAGCAT ATAAAAAGTG ACTTAGTCAG CATTGCTAAG ATATTGAATA TCAACTGGAT TGAGCGCGGA ATTAAAAACG ATGCCCGCTT GATTTGCTCC CGCGGCGCCG TCTGCCCACG GCAACCCAGC TGTTATCAAG CGGGTAAATC CCAGTGTGAT GGGGCTGAGT AA
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Protein sequence | MRKSHFLGTK IRNLRKRNNL TMEDLSARCI RVDASSAPSV SYLSMIERGK RVPSAEMLAV IATVFQKDVD WFLDDVPEES AITPDKGRRG GISGMALEPS FLFSNDILQI AIPEMLSQTG ISGRQFAHLL IRAHQEHHQN HFPDLERAAE EVGLKRMPLS LDEMLDIAKG VGLKIKWIDS TPQEVIDERG VSSHQLVTSF FEPPSTIYIN KMLKNRPSRL KYDLAAHIGH CVLHNKDGLK SVMISGRKLQ MDEEVTMQSN TLNAQDILHA WRDFESSFFA GALLCPKVPY RQLLDRHGYE IEVHKQLQVS ASVAMRRMTV VSPYPHWHYF DAYAPGKLKA VYRGNGIPLP WGNMRLVEDP CQHWAVFRMI SEPSVGTSAQ ISILNVGNEP RIYCCESIKV EDSAGNPHVL CAGIDLNPAI EAQGKDALSI AHDLKAACVT GGGSVAIPKH IKSDLVSIAK ILNINWIERG IKNDARLICS RGAVCPRQPS CYQAGKSQCD GAE
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