| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2259 |
|---|
| Symbol | |
|---|
| ID | 8429242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 2428296 |
|---|
| End bp | 2429063 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 645034566 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003191696 |
|---|
| Protein GI | 258515474 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00208232 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTCA GGGGAGAACA AATCCGGGCA TTGCGTGAAG AGCGAGGATA TACCTTACAA
GAGTTGGCTC GCAGAGCCAA CTTATCTTTT TCATATTTGA GTGAAATTGA AAGAGGTTCT
AAAAAACCTT CTTTGAAAAC CATTGAAAAA CTGGCCGCTG TTTTAAATGT TGCCAAATCT
CAACTTGTAG AAAATGACTT AAACGATGCC GGGCTAACAC TGGGGAATAA AATAAGAATG
CTGCGCAATG AAAAAGCGCT GTCCTTGCAG GAACTATCGA CAACCTCAGA AATATCGTTA
TCCTACCTTA GTGAAATCGA GCGAGGAACA ATATACCCGT CATTAAACAC TTTGAAGAAA
ATTTCTGAAT CCCTGGATGT ATCTGCTTCG GTGTTAATGA GTTATGAAGG ATCTCTGGGG
AATAAATTAA AAGCTCTACG AGAAAAACAA GGCTATACCC AGGCCAAACT GGCTGAATTA
GCAGGGGTAA CTGCCGGTTT AATCGGTCAA ATCGAGCAAT CCAAAGTGCA GCCCTCTTTA
AAAACCCTGG AAAAATTATC AGGAGTTCTT GGCATTTCCG CATGCTATTT CATTATGGAG
CCGGGAGCGG TTGAGCAAAT TATTAATATG ATGACTCCGG AACTAAGAGA AATGCTTTTA
GATCCCAAGG TCCAATCCGT ATTAGGATTG ATAGCGAATT TAAATGAGAA AGAGCTTCAG
TTTGTTTTAA ATTTCATACA ATTGTTAAAG CGGTCCGATT TAAATTAA
|
|---|
| Protein sequence | MIVRGEQIRA LREERGYTLQ ELARRANLSF SYLSEIERGS KKPSLKTIEK LAAVLNVAKS
QLVENDLNDA GLTLGNKIRM LRNEKALSLQ ELSTTSEISL SYLSEIERGT IYPSLNTLKK
ISESLDVSAS VLMSYEGSLG NKLKALREKQ GYTQAKLAEL AGVTAGLIGQ IEQSKVQPSL
KTLEKLSGVL GISACYFIME PGAVEQIINM MTPELREMLL DPKVQSVLGL IANLNEKELQ
FVLNFIQLLK RSDLN
|
|---|
| |