| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0731 |
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| Symbol | |
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| ID | 3578936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 860663 |
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| End bp | 861919 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637684424 |
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| Product | helix-hairpin-helix DNA-binding motif-containing protein |
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| Protein accession | YP_288792 |
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| Protein GI | 72161135 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00340964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGAGG AGAACGTTTC GTTCGGGGCT GAACTCCGCC GGCTGCGCAC GGAAGCCGGA
TGGAGCCTCG CGGACCTCGC GGAAGCAGTG CACTACAGCA AAAGCCACCT GTCCAAAGTG
GAGACGGGCC GCAAATCCCC CTCCGCTGAC CTAGCCCGTG CCTGCGACAC CGCGCTCGGC
GCCGAAGGCC GCCTTGCTGC GCTGGTCCGC GGACGTCGGC CCACCACCCG ATCCGGTGCC
TCGGGGCCGC CGCTGCCCGC CGCAGGCCCT CCCCTGTCGC CGCCCCACGC GTTCGCCCTC
GGAGCGGGGG CACTGCTCGG TTTAGGGCCT TCCGGTAAAG AACCGCCCGC TTTCCTGGGG
TCCGCGGACG TGCTCACCGC GTTCCGCTCG ATGTTCGACC AGGCTCGGGT CCTCGGCCAG
CGCACCGGCC CCACCCTGGT CCTGCCGACC GTGGCCGCGC AAGCCCACGC ACTCACCCGG
CTGGCCCGTG GCGCCAAACC GAAACTAGCG GTTCCCGCGC TCCTCCTCGC TTCCCGGTTC
GCCGAATACG GCGGCTGGCT TGCCCAAGAA GCAGGCAACA GCCACGGCGC CCTGTGGTGG
ACCAAACACG CCGTGGACCT TGCTGCCCAG GCCGGGGACC AGGAAATGCG GGCCCAGGCT
CTGATCCGCC GGGCCTGTGT AGCCATGTAC GCCCACGACG GCCTGCACAC CGTCGCCTTG
GCCCAGCAGG CGTACGCGAT CGCTCCCTCG CCCCGGCTCC GCGCTATGGC AAGCGAACGC
GAAGCCCAAG GACACGCCCT GACCGGCGAC TACGACCAAT GCCGCCGTGC CCTGGACCGG
GCCGAGAAGG AAGCAGCGCA CGAGACCGCG GAACCGTCAG ACCGTCCCCT TCTGGGGAGT
TCGACAGTGC CGAACCGGCT CGCTGTCGTC ACGGGATGGT GCATGTACGA TCTCGGCCGC
CCTGCTGAGG CGGCCGAGAT CCTTGACCGG GAGCTTTCCG CGATCCCCCA CACCGCGGTG
CGCGCCCGGG TCCGGTTCGG GATGCGGCGT GCGCTCGCGC ACGCCGCCGC AGGCAACCTG
GAACGCGCCT GCACCCTCGC ACACGGCCTG TTGGAGAAGT TCGCCGCCGT GGACTCCGCG
ACCGTCGCCC ACGACGTCCG CCAACTCGCG CGCACCCTCT CCCGCTGGCA CAACGACCCG
GCAGTCCGGA ACCTCAACCC CCGGCTGGTC CTGGCGCTGC GTCGGGCCCC GGTGTGA
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| Protein sequence | MGEENVSFGA ELRRLRTEAG WSLADLAEAV HYSKSHLSKV ETGRKSPSAD LARACDTALG
AEGRLAALVR GRRPTTRSGA SGPPLPAAGP PLSPPHAFAL GAGALLGLGP SGKEPPAFLG
SADVLTAFRS MFDQARVLGQ RTGPTLVLPT VAAQAHALTR LARGAKPKLA VPALLLASRF
AEYGGWLAQE AGNSHGALWW TKHAVDLAAQ AGDQEMRAQA LIRRACVAMY AHDGLHTVAL
AQQAYAIAPS PRLRAMASER EAQGHALTGD YDQCRRALDR AEKEAAHETA EPSDRPLLGS
STVPNRLAVV TGWCMYDLGR PAEAAEILDR ELSAIPHTAV RARVRFGMRR ALAHAAAGNL
ERACTLAHGL LEKFAAVDSA TVAHDVRQLA RTLSRWHNDP AVRNLNPRLV LALRRAPV
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