Gene Tfu_0731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0731 
Symbol 
ID3578936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp860663 
End bp861919 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content71% 
IMG OID637684424 
Producthelix-hairpin-helix DNA-binding motif-containing protein 
Protein accessionYP_288792 
Protein GI72161135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00340964 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGAGG AGAACGTTTC GTTCGGGGCT GAACTCCGCC GGCTGCGCAC GGAAGCCGGA 
TGGAGCCTCG CGGACCTCGC GGAAGCAGTG CACTACAGCA AAAGCCACCT GTCCAAAGTG
GAGACGGGCC GCAAATCCCC CTCCGCTGAC CTAGCCCGTG CCTGCGACAC CGCGCTCGGC
GCCGAAGGCC GCCTTGCTGC GCTGGTCCGC GGACGTCGGC CCACCACCCG ATCCGGTGCC
TCGGGGCCGC CGCTGCCCGC CGCAGGCCCT CCCCTGTCGC CGCCCCACGC GTTCGCCCTC
GGAGCGGGGG CACTGCTCGG TTTAGGGCCT TCCGGTAAAG AACCGCCCGC TTTCCTGGGG
TCCGCGGACG TGCTCACCGC GTTCCGCTCG ATGTTCGACC AGGCTCGGGT CCTCGGCCAG
CGCACCGGCC CCACCCTGGT CCTGCCGACC GTGGCCGCGC AAGCCCACGC ACTCACCCGG
CTGGCCCGTG GCGCCAAACC GAAACTAGCG GTTCCCGCGC TCCTCCTCGC TTCCCGGTTC
GCCGAATACG GCGGCTGGCT TGCCCAAGAA GCAGGCAACA GCCACGGCGC CCTGTGGTGG
ACCAAACACG CCGTGGACCT TGCTGCCCAG GCCGGGGACC AGGAAATGCG GGCCCAGGCT
CTGATCCGCC GGGCCTGTGT AGCCATGTAC GCCCACGACG GCCTGCACAC CGTCGCCTTG
GCCCAGCAGG CGTACGCGAT CGCTCCCTCG CCCCGGCTCC GCGCTATGGC AAGCGAACGC
GAAGCCCAAG GACACGCCCT GACCGGCGAC TACGACCAAT GCCGCCGTGC CCTGGACCGG
GCCGAGAAGG AAGCAGCGCA CGAGACCGCG GAACCGTCAG ACCGTCCCCT TCTGGGGAGT
TCGACAGTGC CGAACCGGCT CGCTGTCGTC ACGGGATGGT GCATGTACGA TCTCGGCCGC
CCTGCTGAGG CGGCCGAGAT CCTTGACCGG GAGCTTTCCG CGATCCCCCA CACCGCGGTG
CGCGCCCGGG TCCGGTTCGG GATGCGGCGT GCGCTCGCGC ACGCCGCCGC AGGCAACCTG
GAACGCGCCT GCACCCTCGC ACACGGCCTG TTGGAGAAGT TCGCCGCCGT GGACTCCGCG
ACCGTCGCCC ACGACGTCCG CCAACTCGCG CGCACCCTCT CCCGCTGGCA CAACGACCCG
GCAGTCCGGA ACCTCAACCC CCGGCTGGTC CTGGCGCTGC GTCGGGCCCC GGTGTGA
 
Protein sequence
MGEENVSFGA ELRRLRTEAG WSLADLAEAV HYSKSHLSKV ETGRKSPSAD LARACDTALG 
AEGRLAALVR GRRPTTRSGA SGPPLPAAGP PLSPPHAFAL GAGALLGLGP SGKEPPAFLG
SADVLTAFRS MFDQARVLGQ RTGPTLVLPT VAAQAHALTR LARGAKPKLA VPALLLASRF
AEYGGWLAQE AGNSHGALWW TKHAVDLAAQ AGDQEMRAQA LIRRACVAMY AHDGLHTVAL
AQQAYAIAPS PRLRAMASER EAQGHALTGD YDQCRRALDR AEKEAAHETA EPSDRPLLGS
STVPNRLAVV TGWCMYDLGR PAEAAEILDR ELSAIPHTAV RARVRFGMRR ALAHAAAGNL
ERACTLAHGL LEKFAAVDSA TVAHDVRQLA RTLSRWHNDP AVRNLNPRLV LALRRAPV