More than 300 homologs were found in PanDaTox collection
for query gene Gbem_1167 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_3126  methyl-accepting chemotaxis sensory transducer  93.6 
 
 
703 aa  1295    Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1167  methyl-accepting chemotaxis sensory transducer  100 
 
 
703 aa  1416    Geobacter bemidjiensis Bem  Bacteria  normal  0.658194  n/a   
 
 
-
 
NC_009483  Gura_3281  methyl-accepting chemotaxis sensory transducer  28.63 
 
 
736 aa  179  1e-43  Geobacter uraniireducens Rf4  Bacteria  normal  0.494868  n/a   
 
 
-
 
NC_002939  GSU0766  methyl-accepting chemotaxis protein, putative  29.07 
 
 
745 aa  173  1e-41  Geobacter sulfurreducens PCA  Bacteria  normal  0.696907  n/a   
 
 
-
 
NC_009483  Gura_0349  methyl-accepting chemotaxis sensory transducer  27.81 
 
 
695 aa  165  2.0000000000000002e-39  Geobacter uraniireducens Rf4  Bacteria  normal  0.0100327  n/a   
 
 
-
 
NC_002939  GSU0583  methyl-accepting chemotaxis protein  28.85 
 
 
538 aa  159  1e-37  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3351  methyl-accepting chemotaxis sensory transducer  26.3 
 
 
734 aa  159  2e-37  Geobacter bemidjiensis Bem  Bacteria  normal  0.0143974  n/a   
 
 
-
 
NC_009483  Gura_4018  methyl-accepting chemotaxis sensory transducer  28.3 
 
 
713 aa  156  1e-36  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000208845  n/a   
 
 
-
 
NC_012918  GM21_0894  methyl-accepting chemotaxis sensory transducer  26.62 
 
 
734 aa  155  2e-36  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.23916e-31 
 
 
-
 
NC_009483  Gura_0165  methyl-accepting chemotaxis sensory transducer  27.27 
 
 
568 aa  152  1e-35  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1239  methyl-accepting chemotaxis sensory transducer  23.99 
 
 
719 aa  149  2.0000000000000003e-34  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2692  methyl-accepting chemotaxis sensory transducer  25.55 
 
 
768 aa  147  7.0000000000000006e-34  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2938  methyl-accepting chemotaxis sensory transducer  27.5 
 
 
564 aa  146  1e-33  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.0000000000740162 
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  24.3 
 
 
549 aa  145  2e-33  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  29.8 
 
 
661 aa  145  2e-33  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.67 
 
 
546 aa  146  2e-33  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  28.43 
 
 
546 aa  145  3e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2478  methyl-accepting chemotaxis sensory transducer  27.25 
 
 
733 aa  143  8e-33  Geobacter metallireducens GS-15  Bacteria  normal  0.513858  normal 
 
 
-
 
NC_009483  Gura_2483  methyl-accepting chemotaxis sensory transducer  25.89 
 
 
675 aa  142  1.9999999999999998e-32  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1774  methyl-accepting chemotaxis sensory transducer  27.45 
 
 
671 aa  141  3e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2372  methyl-accepting chemotaxis protein, putative  27.48 
 
 
727 aa  138  3.0000000000000003e-31  Geobacter sulfurreducens PCA  Bacteria  normal  0.204529  n/a   
 
 
-
 
NC_011146  Gbem_3654  methyl-accepting chemotaxis sensory transducer  26.42 
 
 
822 aa  135  3e-30  Geobacter bemidjiensis Bem  Bacteria  normal  0.720146  n/a   
 
 
-
 
NC_012918  GM21_3761  methyl-accepting chemotaxis sensory transducer  25.95 
 
 
822 aa  135  3e-30  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  25.21 
 
 
674 aa  135  3e-30  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  29.77 
 
 
627 aa  135  3.9999999999999996e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  28.63 
 
 
626 aa  132  2.0000000000000002e-29  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  28.29 
 
 
564 aa  131  4.0000000000000003e-29  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  29.95 
 
 
411 aa  131  4.0000000000000003e-29  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  34.56 
 
 
550 aa  130  7.000000000000001e-29  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_009674  Bcer98_0489  methyl-accepting chemotaxis sensory transducer  25.96 
 
 
660 aa  130  9.000000000000001e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2579  methyl-accepting chemotaxis protein  28.74 
 
 
543 aa  128  4.0000000000000003e-28  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2889  methyl-accepting chemotaxis sensory transducer  27.87 
 
 
567 aa  128  4.0000000000000003e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0058  methyl-accepting chemotaxis sensory transducer  26.63 
 
 
688 aa  128  4.0000000000000003e-28  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  29.02 
 
 
638 aa  127  5e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009012  Cthe_2819  methyl-accepting chemotaxis sensory transducer  26.21 
 
 
1474 aa  127  6e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1869  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.67 
 
 
607 aa  127  6e-28  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011145  AnaeK_0063  methyl-accepting chemotaxis sensory transducer  26.63 
 
 
688 aa  127  8.000000000000001e-28  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1082  methyl-accepting chemotaxis sensory transducer  27.48 
 
 
495 aa  127  8.000000000000001e-28  Shewanella baltica OS155  Bacteria  hitchhiker  0.000101058  n/a   
 
 
-
 
NC_009665  Shew185_1142  methyl-accepting chemotaxis sensory transducer  27.48 
 
 
495 aa  127  1e-27  Shewanella baltica OS185  Bacteria  normal  0.0413666  n/a   
 
 
-
 
NC_009997  Sbal195_1176  methyl-accepting chemotaxis sensory transducer  27.48 
 
 
495 aa  126  1e-27  Shewanella baltica OS195  Bacteria  hitchhiker  0.00652986  normal 
 
 
-
 
NC_011891  A2cp1_0075  methyl-accepting chemotaxis sensory transducer  26.63 
 
 
688 aa  127  1e-27  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3213  methyl-accepting chemotaxis sensory transducer  27.48 
 
 
495 aa  125  2e-27  Shewanella baltica OS223  Bacteria  normal  0.023485  normal 
 
 
-
 
NC_010814  Glov_1121  methyl-accepting chemotaxis sensory transducer  28 
 
 
557 aa  125  3e-27  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0000918445  n/a   
 
 
-
 
NC_010814  Glov_0882  methyl-accepting chemotaxis sensory transducer  28.16 
 
 
540 aa  124  4e-27  Geobacter lovleyi SZ  Bacteria  normal  0.566239  n/a   
 
 
-
 
NC_002939  GSU1041  methyl-accepting chemotaxis protein  30.03 
 
 
541 aa  124  7e-27  Geobacter sulfurreducens PCA  Bacteria  normal  0.893443  n/a   
 
 
-
 
NC_013501  Rmar_2177  methyl-accepting chemotaxis sensory transducer  25.65 
 
 
628 aa  124  7e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0771  methyl-accepting chemotaxis sensory transducer  30.35 
 
 
822 aa  123  9.999999999999999e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  34.18 
 
 
541 aa  122  3e-26  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  26.51 
 
 
557 aa  122  3e-26  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_010814  Glov_0889  methyl-accepting chemotaxis sensory transducer  25.27 
 
 
540 aa  122  3e-26  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1516  methyl-accepting chemotaxis sensory transducer  25.56 
 
 
660 aa  122  3e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1148  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.04 
 
 
650 aa  121  4.9999999999999996e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.605213  n/a   
 
 
-
 
NC_008609  Ppro_2677  methyl-accepting chemotaxis sensory transducer  36.32 
 
 
818 aa  120  9e-26  Pelobacter propionicus DSM 2379  Bacteria  normal  0.730239  n/a   
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  38.16 
 
 
542 aa  119  9.999999999999999e-26  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_4287  methyl-accepting chemotaxis sensory transducer  28.86 
 
 
854 aa  119  9.999999999999999e-26  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  38.14 
 
 
544 aa  120  9.999999999999999e-26  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  27.48 
 
 
624 aa  119  9.999999999999999e-26  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0476  methyl-accepting chemotaxis sensory transducer  29.51 
 
 
830 aa  120  9.999999999999999e-26  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5181  methyl-accepting chemotaxis protein  27.76 
 
 
563 aa  119  1.9999999999999998e-25  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.0000000942928  n/a   
 
 
-
 
NC_013161  Cyan8802_4347  methyl-accepting chemotaxis sensory transducer  27.98 
 
 
854 aa  119  1.9999999999999998e-25  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_3465  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
423 aa  119  1.9999999999999998e-25  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4865  methyl-accepting chemotaxis sensory transducer  27.56 
 
 
563 aa  119  1.9999999999999998e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1221  methyl-accepting chemotaxis sensory transducer  34.39 
 
 
544 aa  119  1.9999999999999998e-25  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000143655  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0489  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.81 
 
 
650 aa  118  3e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3293  methyl-accepting chemotaxis sensory transducer  30.35 
 
 
720 aa  118  3e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.601  n/a   
 
 
-
 
NC_007519  Dde_3295  methyl-accepting chemotaxis sensory transducer  30.75 
 
 
720 aa  118  3e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.0000403269  n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  28.17 
 
 
628 aa  118  3e-25  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0724  methyl-accepting chemotaxis sensory transducer  32.41 
 
 
539 aa  118  3e-25  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3525  methyl-accepting chemotaxis sensory transducer  34.43 
 
 
658 aa  118  3.9999999999999997e-25  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3876  methyl-accepting chemotaxis sensory transducer  34.96 
 
 
535 aa  118  3.9999999999999997e-25  Geobacter bemidjiensis Bem  Bacteria  normal  0.74566  n/a   
 
 
-
 
NC_008554  Sfum_1648  methyl-accepting chemotaxis sensory transducer  24.46 
 
 
832 aa  118  3.9999999999999997e-25  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.365743  normal  0.0253033 
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  30.56 
 
 
540 aa  118  3.9999999999999997e-25  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_010003  Pmob_1607  methyl-accepting chemotaxis sensory transducer  25.89 
 
 
668 aa  117  5e-25  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  25.38 
 
 
547 aa  117  6e-25  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013411  GYMC61_2101  methyl-accepting chemotaxis sensory transducer  25.6 
 
 
565 aa  117  6e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_2890  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
549 aa  117  6e-25  Geobacter lovleyi SZ  Bacteria  normal  0.824592  n/a   
 
 
-
 
NC_010424  Daud_1561  methyl-accepting chemotaxis sensory transducer  31.69 
 
 
528 aa  117  6e-25  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4769  methyl-accepting chemotaxis protein  28.05 
 
 
563 aa  117  6.9999999999999995e-25  Bacillus cereus E33L  Bacteria  decreased coverage  0.000157203  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  24.33 
 
 
554 aa  117  7.999999999999999e-25  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_5150  chemotaxis signal transducer  28.05 
 
 
563 aa  117  7.999999999999999e-25  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000223621 
 
 
-
 
NC_005957  BT9727_4750  chemotaxis signal transducer  28.05 
 
 
563 aa  117  7.999999999999999e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.000000000451458  n/a   
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  25.7 
 
 
554 aa  117  7.999999999999999e-25  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013502  Rmar_2870  methyl-accepting chemotaxis sensory transducer  35.83 
 
 
636 aa  117  8.999999999999998e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0343  methyl-accepting chemotaxis sensory transducer  29 
 
 
1079 aa  117  8.999999999999998e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1714  methyl-accepting chemotaxis sensory transducer  26.76 
 
 
673 aa  117  1.0000000000000001e-24  Halorhodospira halophila SL1  Bacteria  normal  0.712235  n/a   
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  25.12 
 
 
554 aa  116  1.0000000000000001e-24  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  25.37 
 
 
554 aa  116  1.0000000000000001e-24  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  25.37 
 
 
554 aa  116  1.0000000000000001e-24  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_011773  BCAH820_3282  methyl-accepting chemotaxis protein  29.3 
 
 
660 aa  116  1.0000000000000001e-24  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  26.16 
 
 
540 aa  117  1.0000000000000001e-24  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  25.37 
 
 
554 aa  117  1.0000000000000001e-24  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3719  methyl-accepting chemotaxis sensory transducer  32.12 
 
 
540 aa  116  1.0000000000000001e-24  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  35.02 
 
 
549 aa  116  2.0000000000000002e-24  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  32.02 
 
 
696 aa  115  2.0000000000000002e-24  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1373  methyl-accepting chemotaxis sensory transducer  26.86 
 
 
571 aa  116  2.0000000000000002e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1029  methyl-accepting chemotaxis protein  32.79 
 
 
549 aa  115  2.0000000000000002e-24  Geobacter sulfurreducens PCA  Bacteria  normal  0.392996  n/a   
 
 
-
 
NC_005945  BAS3056  methyl-accepting chemotaxis protein  29.3 
 
 
650 aa  116  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  26.61 
 
 
713 aa  116  2.0000000000000002e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_007519  Dde_3246  methyl-accepting chemotaxis sensory transducer  26.92 
 
 
601 aa  115  2.0000000000000002e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.416407  n/a   
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  32.12 
 
 
540 aa  116  2.0000000000000002e-24  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
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