100 homologs were found in PanDaTox collection
for query gene DvMF_0645 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_0645  formate dehydrogenase accessory protein  100 
 
 
337 aa  667    Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0493202 
 
 
-
 
NC_008554  Sfum_0038  protein involved in formate dehydrogenase formation  36.99 
 
 
336 aa  139  7e-32  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.0000731666  normal  0.296733 
 
 
-
 
NC_013223  Dret_0279  formate dehydrogenase accessory protein  36.75 
 
 
294 aa  100  4e-20  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0706  formate dehydrogenase formation protein FdhE, putative  30.41 
 
 
293 aa  90.1  5e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1233  formate dehydrogenase accessory protein  33.51 
 
 
303 aa  89.7  7e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0243277 
 
 
-
 
NC_008751  Dvul_0503  formate dehydrogenase formation protein FdhE, putative  29.01 
 
 
315 aa  88.6  1e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.511781 
 
 
-
 
NC_013385  Adeg_1197  formate dehydrogenase accessory protein  35.12 
 
 
265 aa  88.2  2e-16  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2375  formate dehydrogenase formation protein FdhE, putative  28.46 
 
 
293 aa  88.6  2e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  0.826547  normal 
 
 
-
 
NC_009253  Dred_1117  hypothetical protein  27.5 
 
 
269 aa  87.8  3e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1572  uncharacterized protein involved in formate dehydrogenase formation-like protein  37.17 
 
 
280 aa  87  4e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2641  formate dehydrogenase accessory protein  36.28 
 
 
280 aa  85.5  0.000000000000001  Geobacter sp. M21  Bacteria  n/a    normal  0.0951215 
 
 
-
 
NC_011769  DvMF_0648  formate dehydrogenase accessory protein  29.23 
 
 
321 aa  84.7  0.000000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.244649 
 
 
-
 
NC_011883  Ddes_0557  formate dehydrogenase accessory protein  29.23 
 
 
325 aa  84  0.000000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0185  formate dehydrogenase accessory protein FdhE, putative  27.1 
 
 
282 aa  84  0.000000000000004  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_174  molybdopterin oxidoreductase, formate dehydrogenase accessory protein  26.83 
 
 
282 aa  82.8  0.000000000000008  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.000105783  n/a   
 
 
-
 
NC_008009  Acid345_0871  hypothetical protein  28.03 
 
 
251 aa  80.9  0.00000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_0167  hypothetical protein  24.39 
 
 
282 aa  80.5  0.00000000000004  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000455155  n/a   
 
 
-
 
NC_007519  Dde_3515  formate dehydrogenase formation protein FdhE, putative  35.71 
 
 
307 aa  80.1  0.00000000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1568  formate dehydrogenase formation protein FdhE, putative  34.43 
 
 
311 aa  78.6  0.0000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1332  uncharacterized protein involved in formate dehydrogenase formation  33.33 
 
 
272 aa  78.6  0.0000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0982  formate dehydrogenase accessory protein  33.73 
 
 
294 aa  76.3  0.0000000000006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3371  hypothetical protein  33.78 
 
 
281 aa  74.3  0.000000000003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2589  hypothetical protein  31.4 
 
 
282 aa  68.9  0.0000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3590  formate dehydrogenase accessory protein FdhE  34.48 
 
 
303 aa  68.6  0.0000000002  Thauera sp. MZ1T  Bacteria  normal  0.510238  n/a   
 
 
-
 
NC_007517  Gmet_1004  formate dehydrogenase formation protein FdhE, putative  31.36 
 
 
280 aa  67.4  0.0000000004  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0796  hypothetical protein  32.38 
 
 
275 aa  66.6  0.0000000006  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.230718  n/a   
 
 
-
 
NC_009675  Anae109_3041  putative formate dehydrogenase formation protein  30.07 
 
 
286 aa  66.2  0.0000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.856963  normal 
 
 
-
 
NC_010322  PputGB1_0535  formate dehydrogenase accessory protein FdhE  30.26 
 
 
306 aa  63.9  0.000000003  Pseudomonas putida GB-1  Bacteria  normal  normal  0.849545 
 
 
-
 
NC_007760  Adeh_2086  putative formate dehydrogenase formation protein  29.77 
 
 
276 aa  64.3  0.000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2011  formate dehydrogenase accessory protein FdhE  29.86 
 
 
288 aa  64.3  0.000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.716423  normal 
 
 
-
 
NC_008554  Sfum_1276  hypothetical protein  27.07 
 
 
300 aa  63.5  0.000000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.849487  normal 
 
 
-
 
NC_007760  Adeh_3757  formate dehydrogenase accessory protein FdhE  32.89 
 
 
284 aa  62.4  0.00000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.60854  n/a   
 
 
-
 
NC_011145  AnaeK_1791  putative formate dehydrogenase formation protein  29.48 
 
 
276 aa  62  0.00000001  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2097  formate dehydrogenase accessory protein  32.24 
 
 
316 aa  62.4  0.00000001  Burkholderia sp. 383  Bacteria  normal  0.162147  normal 
 
 
-
 
NC_011891  A2cp1_3897  formate dehydrogenase accessory protein FdhE  31.4 
 
 
284 aa  62  0.00000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1815  formate dehydrogenase accessory protein  34.78 
 
 
302 aa  62.4  0.00000001  Dechloromonas aromatica RCB  Bacteria  normal  0.608787  normal  0.064168 
 
 
-
 
NC_011666  Msil_3328  formate dehydrogenase accessory protein FdhE  32.74 
 
 
309 aa  61.6  0.00000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.518348 
 
 
-
 
NC_010086  Bmul_4594  formate dehydrogenase accessory protein FdhE  33.55 
 
 
316 aa  61.2  0.00000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0729287  normal  0.966332 
 
 
-
 
NC_011891  A2cp1_1870  formate dehydrogenase accessory protein  27.82 
 
 
276 aa  61.6  0.00000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.45516  n/a   
 
 
-
 
NC_008009  Acid345_0456  hypothetical protein  30.09 
 
 
282 aa  61.2  0.00000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.624877 
 
 
-
 
NC_010552  BamMC406_3882  formate dehydrogenase accessory protein FdhE  33.06 
 
 
311 aa  60.8  0.00000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.884672  normal 
 
 
-
 
NC_008391  Bamb_3380  formate dehydrogenase accessory protein FdhE  33.06 
 
 
338 aa  60.8  0.00000003  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3813  formate dehydrogenase accessory protein FdhE  31.4 
 
 
284 aa  60.8  0.00000003  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0727  formate dehydrogenase accessory protein FdhE  33.33 
 
 
322 aa  60.5  0.00000004  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2256  formate dehydrogenase accessory protein FdhE  33.33 
 
 
322 aa  60.5  0.00000004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.308302  n/a   
 
 
-
 
NC_009075  BURPS668_A2393  formate dehydrogenase accessory protein FdhE  33.33 
 
 
322 aa  60.5  0.00000004  Burkholderia pseudomallei 668  Bacteria  normal  0.0413827  n/a   
 
 
-
 
NC_010424  Daud_1577  putative formate dehydrogenase formation protein  27.89 
 
 
282 aa  60.5  0.00000004  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.396578  n/a   
 
 
-
 
NC_009079  BMA10247_A0574  formate dehydrogenase accessory protein  33.33 
 
 
322 aa  60.5  0.00000004  Burkholderia mallei NCTC 10247  Bacteria  normal  0.893619  n/a   
 
 
-
 
NC_008835  BMA10229_1902  formate dehydrogenase accessory protein  33.33 
 
 
322 aa  60.5  0.00000004  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1695  formate dehydrogenase accessory protein  33.33 
 
 
322 aa  60.5  0.00000004  Burkholderia mallei SAVP1  Bacteria  normal  0.672608  n/a   
 
 
-
 
NC_006349  BMAA1680  formate dehydrogenase accessory protein  33.33 
 
 
322 aa  60.5  0.00000004  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3541  formate dehydrogenase accessory protein FdhE  33.06 
 
 
311 aa  60.1  0.00000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0540431  normal 
 
 
-
 
NC_010623  Bphy_4521  formate dehydrogenase accessory protein FdhE  30.97 
 
 
310 aa  60.5  0.00000005  Burkholderia phymatum STM815  Bacteria  normal  0.269585  normal 
 
 
-
 
NC_008543  Bcen2424_3987  formate dehydrogenase accessory protein FdhE  33.06 
 
 
316 aa  60.1  0.00000005  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4379  formate dehydrogenase accessory protein FdhE  33.06 
 
 
316 aa  59.7  0.00000007  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.855008  n/a   
 
 
-
 
NC_013385  Adeg_0285  formate dehydrogenase accessory protein  34.95 
 
 
273 aa  59.3  0.00000009  Ammonifex degensii KC4  Bacteria  normal  0.135303  n/a   
 
 
-
 
NC_007650  BTH_II0710  formate dehydrogenase accessory protein FdhE  33.6 
 
 
320 aa  58.5  0.0000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0608  formate dehydrogenase accessory protein  26.32 
 
 
289 aa  57.4  0.0000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_0547  formate dehydrogenase accessory protein FdhE  31.09 
 
 
316 aa  56.2  0.0000007  Pseudomonas putida W619  Bacteria  normal  normal  0.178181 
 
 
-
 
NC_008698  Tpen_0045  hypothetical protein  27.08 
 
 
277 aa  55.5  0.000001  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2701  formate dehydrogenase accessory protein  30 
 
 
308 aa  55.5  0.000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.985354  normal  0.113701 
 
 
-
 
NC_009668  Oant_2866  formate dehydrogenase accessory protein FdhE  31.06 
 
 
303 aa  54.7  0.000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0914212  n/a   
 
 
-
 
NC_002947  PP_0492  formate dehydrogenase accessory protein FdhE  31.9 
 
 
318 aa  54.3  0.000003  Pseudomonas putida KT2440  Bacteria  normal  normal  0.379246 
 
 
-
 
NC_009997  Sbal195_0108  formate dehydrogenase accessory protein FdhE  29.48 
 
 
301 aa  53.9  0.000003  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0526  formate dehydrogenase accessory protein FdhE  31.9 
 
 
308 aa  54.3  0.000003  Pseudomonas putida F1  Bacteria  normal  normal  0.963128 
 
 
-
 
NC_004347  SO_0104  fdhE protein  29.66 
 
 
302 aa  54.3  0.000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_0103  formate dehydrogenase accessory protein FdhE  29.48 
 
 
301 aa  53.9  0.000003  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1089  formate dehydrogenase accessory protein FdhE  28.19 
 
 
331 aa  53.9  0.000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.75102  normal 
 
 
-
 
NC_012560  Avin_03840  formate dehydrogenase accessory protein FdhE  39.47 
 
 
304 aa  52.4  0.00001  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2743  formate dehydrogenase accessory protein FdhE  29.37 
 
 
309 aa  52  0.00001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0107  formate dehydrogenase accessory protein FdhE  29.48 
 
 
301 aa  52  0.00001  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1432  formate dehydrogenase accessory protein FdhE  29.46 
 
 
311 aa  51.2  0.00003  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0105  formate dehydrogenase accessory protein FdhE  28.67 
 
 
302 aa  51.2  0.00003  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0100  formate dehydrogenase accessory protein FdhE  28.67 
 
 
302 aa  51.2  0.00003  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_1822  putative formate dehydrogenase formation protein FdhE  32.05 
 
 
256 aa  50.8  0.00003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_63550  formate dehydrogenase accessory protein FdhE  32.76 
 
 
309 aa  50.8  0.00003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0301804  normal 
 
 
-
 
NC_008577  Shewana3_0105  formate dehydrogenase accessory protein FdhE  28.67 
 
 
302 aa  51.2  0.00003  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1525  formate dehydrogenase accessory protein FdhE  28.57 
 
 
309 aa  51.2  0.00003  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2515  formate dehydrogenase accessory protein FdhE  29.66 
 
 
309 aa  50.4  0.00005  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2826  formate dehydrogenase accessory protein FdhE  28.45 
 
 
302 aa  50.1  0.00005  Paracoccus denitrificans PD1222  Bacteria  normal  0.366284  normal  0.421653 
 
 
-
 
NC_010002  Daci_3487  formate dehydrogenase accessory protein FdhE  29.05 
 
 
324 aa  50.1  0.00005  Delftia acidovorans SPH-1  Bacteria  normal  0.18777  normal 
 
 
-
 
NC_009656  PSPA7_5528  formate dehydrogenase accessory protein FdhE  31.9 
 
 
309 aa  49.3  0.00009  Pseudomonas aeruginosa PA7  Bacteria  normal  0.788402  n/a   
 
 
-
 
NC_009901  Spea_0441  formate dehydrogenase accessory protein FdhE  29.55 
 
 
323 aa  49.3  0.0001  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2092  formate dehydrogenase accessory protein FdhE  32.47 
 
 
299 aa  48.1  0.0002  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.00039183 
 
 
-
 
NC_013165  Shel_21810  uncharacterized protein involved in formate dehydrogenase formation  29.25 
 
 
304 aa  48.1  0.0002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.218643 
 
 
-
 
NC_010676  Bphyt_6557  formate dehydrogenase accessory protein FdhE  29.03 
 
 
331 aa  47  0.0004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.232874  decreased coverage  0.000781967 
 
 
-
 
NC_011071  Smal_3264  formate dehydrogenase accessory protein FdhE  32.56 
 
 
327 aa  46.2  0.0007  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.466325  normal 
 
 
-
 
NC_007952  Bxe_B2550  formate dehydrogenase accessory protein  27.34 
 
 
331 aa  45.4  0.001  Burkholderia xenovorans LB400  Bacteria  normal  0.469755  normal  0.436108 
 
 
-
 
NC_011149  SeAg_B4269  formate dehydrogenase accessory protein FdhE  25.79 
 
 
309 aa  44.7  0.002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4247  formate dehydrogenase accessory protein FdhE  25.79 
 
 
309 aa  44.7  0.002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4360  formate dehydrogenase accessory protein FdhE  25.79 
 
 
309 aa  44.7  0.002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.382122  normal 
 
 
-
 
NC_011080  SNSL254_A4314  formate dehydrogenase accessory protein FdhE  25.79 
 
 
309 aa  44.7  0.002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009073  Pcal_0393  hypothetical protein  28.57 
 
 
195 aa  44.3  0.003  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.0397847 
 
 
-
 
NC_011205  SeD_A4425  formate dehydrogenase accessory protein FdhE  27.97 
 
 
309 aa  43.9  0.004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.248516  normal 
 
 
-
 
NC_009436  Ent638_4088  formate dehydrogenase accessory protein FdhE  27.35 
 
 
309 aa  43.9  0.004  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0659  formate dehydrogenase accessory protein FdhE  30.36 
 
 
317 aa  43.5  0.005  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0343732  normal 
 
 
-
 
CP001637  EcDH1_4093  formate dehydrogenase accessory protein FdhE  26.67 
 
 
309 aa  42.7  0.009  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0041  formate dehydrogenase accessory protein FdhE  30.77 
 
 
309 aa  42.4  0.01  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3767  formate dehydrogenase accessory protein FdhE  30.77 
 
 
309 aa  42.4  0.01  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_4116  formate dehydrogenase accessory protein FdhE  30.77 
 
 
309 aa  42.4  0.01  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
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