| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0104 |
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| Symbol | fdhE |
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| ID | 1168001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 113272 |
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| End bp | 114180 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637342116 |
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| Product | fdhE protein |
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| Protein accession | NP_715746 |
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| Protein GI | 24371704 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3058] Uncharacterized protein involved in formate dehydrogenase formation |
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| TIGRFAM ID | [TIGR01562] formate dehydrogenase accessory protein FdhE |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCATA CAGCCGAGAT ACCTATGGTC CCCGGCAGCG AATCGCCGCT GGAACTTAAA
CCCTTAAAGG CGGTGGACCC TAAAGCTGTG TATCACAGAA GGGCGCAGCG TTTGCTGTCG
TTGGCTAAGG ACTCGCCGCT GGCTGACTAC TTTGAGTTAT GCCGCCGAGT GGTTGCAATT
CAGGCCCGCT TGGCGGCGGA GGCTGACTTC GGTCAGCTGC TCGCTTGGGG GAAAGATGAA
GCGATTCCGC TTTCCCACTT GGGCTCAGAG GCAGATAGCT ATTGGCAAGG ACTGCTGCAA
CAACTGTTAA GTGATCTGCT GCCGCAGGTG GGTGAAGATC TGGCTCGAGT GCTGCGGCTG
TTGATGCAGC AATCCCCAGA ACAACTCACC TCTTGGGGTG CTTCCTTGCG TCAGGGGCAT
ATGAGCGCAG TGCCTGCGCG CTTTAGTTTG TTTATCTGGG CGGCGATGGG GGTCTATTGG
TCCCATTGGG CGCCTATGGT GATCAAACGG ATTGATCAAC GCAAAGTAGC GCAGCAGAAC
CTGTGTCCGA TTTGCGGTAG TCATCCCGTA GCGAGTGTGA TCGTCGACCA GCCGAGAGCG
GGTCTGCGTT ATCTACATTG CAGTTTGTGT GAGAGCGAAT GGCATTACAT TCGTGCCCAC
TGCACTAGCT GTGGTCAGGA TAAAGGGACG ACTCTTTGGT CGTTTGACGA TACTCAGGCG
CAGGTGCGTA TCGAGAGCTG CGACGAATGC CATGGTTACA CCAAGATGAT GTTCGTTGAA
AAGTCACCGT TGATGGATGT AGTGGCTGAC GACTTAGCGA CCTTGATGCT CGACAGTGAG
CTAAATGCCA AGGGCTTTGG AGCGACCACG GTCAATCCAT TGCTGCTGGC CCATGAAACT
GAGCAATAA
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| Protein sequence | MSHTAEIPMV PGSESPLELK PLKAVDPKAV YHRRAQRLLS LAKDSPLADY FELCRRVVAI
QARLAAEADF GQLLAWGKDE AIPLSHLGSE ADSYWQGLLQ QLLSDLLPQV GEDLARVLRL
LMQQSPEQLT SWGASLRQGH MSAVPARFSL FIWAAMGVYW SHWAPMVIKR IDQRKVAQQN
LCPICGSHPV ASVIVDQPRA GLRYLHCSLC ESEWHYIRAH CTSCGQDKGT TLWSFDDTQA
QVRIESCDEC HGYTKMMFVE KSPLMDVVAD DLATLMLDSE LNAKGFGATT VNPLLLAHET
EQ
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