Gene BamMC406_3882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3882 
Symbol 
ID6179432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp879025 
End bp879960 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content68% 
IMG OID641683653 
Productformate dehydrogenase accessory protein FdhE 
Protein accessionYP_001810565 
Protein GI172062914 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3058] Uncharacterized protein involved in formate dehydrogenase formation 
TIGRFAM ID[TIGR01562] formate dehydrogenase accessory protein FdhE 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.884672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACAAC GCATTCTCGA ACCGACCGAG ATCTCGGCGC TCGATCATTC GGCCATTCCG 
CGCTTTCGCC TGCCGGAGCG CGCCACCGTG TTTTCGGCGC GCGCCGCGCG GCTGCGCAAG
CTGGCCGACC TGAACCCGAT CAGCGGCTAC CTGCGGCTCA TGGCCACGGT CGCCGATGCC
CAGCATGCGA CGCTGCAGAC GGTCGAGCTG CCGCTGCCGT CGAAGGAAGC GATCGCGCGT
GCACAGCAGC ATTCGATGCC GCTCGTGCCG GCGCTCGGCG GCGACCGCGA TCCGCGCTGG
CGCGCGGTGC TGTATGAACT GCTCGACCGC GTCGAAGGCG CCGGGCTCGT CAACCCGCAG
CTCGCGAAGC TGCTCGACCG GCTGCGCCTG ATGGCGCCCG CCGAACTCGA TGCGCAGGCC
GAGGCGATCC TCGCGCTGCG CTTCGCCGAG GTCGACCCGG CCACCGCGCC GTTCCTGATG
GCCGCGCTGC AGGTCGTCTG GACCGATCTC GCGAGCCGCA TCGCGCCGGC CGAGATCCCG
TATCTCGACC AGCCGGGGCT GTGCCCCGTG TGCGGCACGC ATCCGGTCGC GAGCGTCGTG
CGCGTCGGCG GCCAGTTCCA GGGCTACCGT TTCCTGCAGT GCGGGCTGTG CACGACCGAG
TGGCACATGG TGCGCACGAA ATGTTCGCAC TGCGACTCGA CCAAGGGCAT CGCTTACCAC
GGGATCGAGG GCGGCAGCGA AGCCATCAAG GCCGAATCGT GCGACGAATG CAAGACTTAT
CGCAAGATCG GCTACCAGGA GAAGGACTAC GAGTTCGAGC CTCTCGCCGA CGATCTCGCG
AGCCTCACGC TCGACCTGTT GATGAACGAA GCCGGCTACC AGCGCAGTTC GCCGAACCCG
CTGCTGTGGC CGGACATGTC GCGCGAAACG GATTGA
 
Protein sequence
MTQRILEPTE ISALDHSAIP RFRLPERATV FSARAARLRK LADLNPISGY LRLMATVADA 
QHATLQTVEL PLPSKEAIAR AQQHSMPLVP ALGGDRDPRW RAVLYELLDR VEGAGLVNPQ
LAKLLDRLRL MAPAELDAQA EAILALRFAE VDPATAPFLM AALQVVWTDL ASRIAPAEIP
YLDQPGLCPV CGTHPVASVV RVGGQFQGYR FLQCGLCTTE WHMVRTKCSH CDSTKGIAYH
GIEGGSEAIK AESCDECKTY RKIGYQEKDY EFEPLADDLA SLTLDLLMNE AGYQRSSPNP
LLWPDMSRET D