Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0105 |
Symbol | |
ID | 4250984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 117678 |
End bp | 118586 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638116647 |
Product | formate dehydrogenase accessory protein FdhE |
Protein accession | YP_732243 |
Protein GI | 113968450 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3058] Uncharacterized protein involved in formate dehydrogenase formation |
TIGRFAM ID | [TIGR01562] formate dehydrogenase accessory protein FdhE |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCATA CAGCCGAGAT ACCTATGGTC CCCGGCAGCG AATCGCCGCT GGAGCTTAAA CCCTTAAAGG CGGTGGACCC TAAAACTGTG TATCACAGAC GGGCGCAGCG TTTGTTGTCG TTGGCTAAGG ACTCGCCGCT GGCCGACTAC TTTGAGCTAT GCCGCCGTGT GGTTGCGATT CAGGCCAGAT TGGCGGCGGA GGCTGACTTC GGTCAGCTTC TCGCTTGGGG GAAAGATGAA GCGATTCCGC TTTCCCACTT GGGTTCAGAG GCAGATAGCT ACTGGCAAGG ACTGCTACAA CAATTGTTAA GCGATCTGCT GCCGCAGGTG GATGAGGATA TGGCGCGAGT GCTGCGTTTA TTGATGCAGC AATCTCCTGA ACAACTCACC TCCTGGGGCA GTGCATTGCG TCAGGGACAT ATGAGCGAAG TGCCCGCGCG CTTCAGTTTG TTTATCTGGG CGGCGATGGG GGTCTACTGG TCCCATTGGG CACCTATGGT GATTAAACGG ATCGATCAAC GCAAAGTCGT GCAGCAGAAC CTATGCCCGA TTTGCGGGTG TCATCCCGTG GCGAGCGTGA TCGTCGACCA GCCGCGAGCG GGTCTGCGTT ATCTGCATTG CAGTTTGTGT GAGAGCGAAT GGCATTACAT TCGCGCCCAC TGCACTAGCT GTGGTCAGGA TAAAGGGACG ACGCTCTGGT CATTCGATGA TGCTAAGGCG CAGGTGCGCA TCGAGAGCTG CGACGAATGC CATGGTTACA CCAAGATGCT GTTCGTCGAA AAGTCACCGC TGATGGATGT AGCGGCCGAC GACTTAGCGA CCCTGATGCT CGACAGTGAG CTAAATGCCA AGGGCTTTGG AGCGACCACG GTCAATCCAT TGCTACTGGC CCACGAAACT GAGCAATAA
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Protein sequence | MSHTAEIPMV PGSESPLELK PLKAVDPKTV YHRRAQRLLS LAKDSPLADY FELCRRVVAI QARLAAEADF GQLLAWGKDE AIPLSHLGSE ADSYWQGLLQ QLLSDLLPQV DEDMARVLRL LMQQSPEQLT SWGSALRQGH MSEVPARFSL FIWAAMGVYW SHWAPMVIKR IDQRKVVQQN LCPICGCHPV ASVIVDQPRA GLRYLHCSLC ESEWHYIRAH CTSCGQDKGT TLWSFDDAKA QVRIESCDEC HGYTKMLFVE KSPLMDVAAD DLATLMLDSE LNAKGFGATT VNPLLLAHET EQ
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