Gene YpsIP31758_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_4116 
SymbolfdhE 
ID5387887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp4645011 
End bp4645940 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content49% 
IMG OID640867145 
Productformate dehydrogenase accessory protein FdhE 
Protein accessionYP_001403059 
Protein GI153949811 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3058] Uncharacterized protein involved in formate dehydrogenase formation 
TIGRFAM ID[TIGR01562] formate dehydrogenase accessory protein FdhE 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTC GTATTGTCCC TAAAGACCAA TTAGGTAAAC AACGCGAAAA AGGTACAACG 
GCGGGGAATA TCCCGCCGTT ACTTTTCGCA AATTTAAAAA GTTTGTATAC CCGACGCACT 
GAACGTTTGC AGCAGTTGGC GCTGGACAAT CCGCTGGCCG ATTATCTGGA TTTTGCGGCC 
AAAATTACTG AAGCCCAGCA AAAAGCACTG CATGACCATC CGTTGGTCTT GGATATGCAA 
GCCGAGTTGG TGCAATCAGC GGCCAGTGGC AAGCCCCCCT TGGACGGGAG TGTTTTTCCG 
CGTACCGAAC ATTGGCGCAA GCTGCTATCC GCGCTGATTG CCGAATTGCG TCACGATGCT 
CCCGACCACA TTTTGGCGGT GCTGGATAAT CTCGATAAAG CATCGGTTCA TGAGCTAGAG 
TTGTACGCTG ATGCCTTGCT AAACCGAGAT TTTTCTCAAG TCGGTAGTGA GAAAGCCCCG 
TTTATCTGGG CCGCTTTATC GCTCTATTGG GCGCAGATGG CCAGCCAGAT CCCTGGCAAA 
GCACGGGCTG AATACGGTGA ACACCGTCAG TTTTGCCCGG TGTGTGGCAG CATTCCGGTT 
TCCAGTGTGG TACATATCGG CACCCATAAT GGCTTGCGTT ATTTGCACTG TAATTTGTGT 
GAAAGCGAAT GGCATGTCGT GCGAATTAAA TGCAGTAACT GTGAGCAAAC CCGTGATCTT 
AACTATTGGT CGTTGGACAG CGAGTTGGCC GCAGTAAAAG CAGAAAGTTG CGGTGATTGT 
GGTACTTACC TAAAAATTCT TTATCAGGAA AAAGACCCGC AGGTGGAAGC GGTCGCTGAT 
GATTTGGCCT CATTGATCCT TGATGCCAAG ATGGAAGGTG AAGGGTTCGC CCGCAGCAGT 
ATTAATCCAT TTTTGTTCCC AGGTGAGTAA
 
Protein sequence
MSIRIVPKDQ LGKQREKGTT AGNIPPLLFA NLKSLYTRRT ERLQQLALDN PLADYLDFAA 
KITEAQQKAL HDHPLVLDMQ AELVQSAASG KPPLDGSVFP RTEHWRKLLS ALIAELRHDA 
PDHILAVLDN LDKASVHELE LYADALLNRD FSQVGSEKAP FIWAALSLYW AQMASQIPGK 
ARAEYGEHRQ FCPVCGSIPV SSVVHIGTHN GLRYLHCNLC ESEWHVVRIK CSNCEQTRDL 
NYWSLDSELA AVKAESCGDC GTYLKILYQE KDPQVEAVAD DLASLILDAK MEGEGFARSS 
INPFLFPGE