Gene Avin_03840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_03840 
SymbolfdhE 
ID7759344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp365744 
End bp366658 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content75% 
IMG OID643803308 
Productformate dehydrogenase accessory protein FdhE 
Protein accessionYP_002797619 
Protein GI226942546 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3058] Uncharacterized protein involved in formate dehydrogenase formation 
TIGRFAM ID[TIGR01562] formate dehydrogenase accessory protein FdhE 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCA TCCGCCTGGT CGCCGACGAA CGGCCGAGCG GCGGCGTCGG CGCCATAGTG 
CCGCTGATCC TGCCCGCCGC GCAGCCGCAT TACCGCCGCC GCGCCGCGCG CCTGCGCCAG
CTCGCCGAGG GCCCCCCGAT GGCCGACTAC CTGCGCTTCG CCGCCGGTAT CGCCGAGGCG
CAGCAGCAGG CCGCCCAGGC GTTGCCGCTG CCCGAGGCGC TGGCCGCCGG CCTGCCCGCC
CGTCTGGGCG GCGCACGGCC GCCGCTGGAG GCCGCCGGCC TGCCGCGCGA GCGGCACTGG
CGCGAACTGT TGCAGGCGTT GTTCGAGCAA CTGCGCGACG CCAGCCCGAC CCCGGCCGTG
GCGCAGACCC TCGCCGGCCT GCGCGGTTGC GACGCAACGG CCCTGGAAAA GCTGGCCGAC
GCCCTGCTGG CCGGCGATTA CGCCAGGGTC GGCAGCGACC GCGCGCTTTT CCTCTGGGCC
GCGCTGTCGC TGTACTGGCG GCAGATGGCC GCGCGCCTGC CGGCCGCCGG CCGCGCCGGG
GTCGGCGAAG GACGCCAGTT CTGCCCGGTG TGCGGCAGCG CGCCGGTGGC CAGCGTGATC
CGCGGCGGCG CCCAGAGCGG CCTGCGCTAC CTGCACTGCG GGCTGTGCGA GAGCCGCTGG
CACATGGTGC GCACCAAGTG CAGCAACTGC GAGGAGGGCG GCCGGCTCGA CTACTGGTCG
CTGGACAGCG AGCAGGCGGC GATCCGCGCG GAAAGCTGCG GCGACTGCCA CGGCTACCTC
AAGGTCCTCC ACGAGGACCG CGACCCGCAG TTGGAGGTGA TCGCCGACGA CCTGGCCTCC
CTGGCCCTGG ATGCCGAGGT GGAGCGCCAG GGCTTTTCCC GCAGCGGCCT CAATCCGTTC
CTTTTTCCGG GCTGA
 
Protein sequence
MNSIRLVADE RPSGGVGAIV PLILPAAQPH YRRRAARLRQ LAEGPPMADY LRFAAGIAEA 
QQQAAQALPL PEALAAGLPA RLGGARPPLE AAGLPRERHW RELLQALFEQ LRDASPTPAV
AQTLAGLRGC DATALEKLAD ALLAGDYARV GSDRALFLWA ALSLYWRQMA ARLPAAGRAG
VGEGRQFCPV CGSAPVASVI RGGAQSGLRY LHCGLCESRW HMVRTKCSNC EEGGRLDYWS
LDSEQAAIRA ESCGDCHGYL KVLHEDRDPQ LEVIADDLAS LALDAEVERQ GFSRSGLNPF
LFPG