| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1004 |
|---|
| Symbol | |
|---|
| ID | 3740347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1118547 |
|---|
| End bp | 1119389 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637778283 |
|---|
| Product | formate dehydrogenase formation protein FdhE, putative |
|---|
| Protein accession | YP_383971 |
|---|
| Protein GI | 78222224 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3058] Uncharacterized protein involved in formate dehydrogenase formation |
|---|
| TIGRFAM ID | [TIGR01562] formate dehydrogenase accessory protein FdhE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 75 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGAG CCGCCGAAAA GAAGGCCTTT GTCGATACGC TGTGCCGCGA GAATCCCGAG
TACACCGAGG TGCTCGCCAT CTTCAGCGAG TTGTATGCCG CCATCGAGGG GAAGGAGGGG
GAGACCGGCC TGACGGTCAC TCTGCCGGAG AGCCCTGCGG CCGACCGCTT GCGTGACGGG
GTCCCTCTCA TCTCCTTCGA TGCCATTGCC GTTGACCGCG AGAAGGCGCT GGCGTTCATC
GGCACGGTGA TTGACGTGAT GCAGCGGATG GGGAATGACG GCGGCGAGAG CCTGGAGCGT
CTCCGGGCCG CACTTGCGGA AGGAGAGGCC GACCTGCTGG CGCTTCTGCG GGGTGTCTTG
GCCCACGAGC GGAGGGTGAT TCTCGAAACG GCCCTGGCGG TCCGCATCGA CCCGGGGCTC
GTGGAATTTG CCTTCCACAC TCCCCTGAGG GTTGCCCTTG AGCAGGTGGC CGAAGGGGTC
GACCCTGGGC TCTATGCCGG CTGGAACAAG CACTTCTGCC CGGTCTGCGG TTCCCCCGCC
GCCATGGCCG AACTGGTGGG GGATGAGGGG GAGCGCCACC TTTCCTGCTC CACCTGTTTC
AGCCGCTGGA CCTACAACCA GCCAAACTGC CCCTTCTGCG GCAACGACGA CCCGGAACAA
CTCACTCATT TCACCACGGG CGAAGGCCCT CACCGGGTTG ATATCTGCCT TGCCTGCTCC
CAGTACCTGA AGACCCGCCT TTCCCCCACG GGGAGCGCCG GCGTGCCGCC GGAACAGGAT
GACCTCGCCA CCGTGCTCCT GGATCTGCTG GCGGCCCAGG AAGGGTACCG GCGGGGGAGG
TGA
|
|---|
| Protein sequence | MPRAAEKKAF VDTLCRENPE YTEVLAIFSE LYAAIEGKEG ETGLTVTLPE SPAADRLRDG
VPLISFDAIA VDREKALAFI GTVIDVMQRM GNDGGESLER LRAALAEGEA DLLALLRGVL
AHERRVILET ALAVRIDPGL VEFAFHTPLR VALEQVAEGV DPGLYAGWNK HFCPVCGSPA
AMAELVGDEG ERHLSCSTCF SRWTYNQPNC PFCGNDDPEQ LTHFTTGEGP HRVDICLACS
QYLKTRLSPT GSAGVPPEQD DLATVLLDLL AAQEGYRRGR
|
|---|
| |