Gene Pcal_0393 details

Gene Information

• Locus tag: Pcal_0393
• ID: 4909902
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 376420
• End bp: 377007
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640124146
• Product: hypothetical protein
• Protein accession: YP_001055294
• Protein GI: 126459016

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.0397847
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGTCCAAAG AGGTTGAGAT AGTCTGCGGG GGGGACTCCC ACTGTGTTGA GGAGGTGAGG 
CGGGCGGTTG AGGAAATCCG ATCCCTTTTT TCAACGCCAA TACCGGAGCC CCATCTCTCC 
TCTCTATCTC CCCCCCTCGT GGACCAAGTG GCCAACATGG CTGAGATTGT GGACGCGGTG 
GGGGATGAGG CCGCGGCAAG GCTGGTGGTG GCGTCTAGGC TTGCGAAGAG GTTTGCGCAG 
AGGTTCGCCG AGTGGAGCGG CGACAGGTGC CCCATCTGTG GAAGTGCCCC AAGGCTCTTC 
GTCGTGGTGC CCCGGCCCGG GGAGATTTTT GAGTCTAGGG AGAGGTACGC CAAGTGCGTC 
TGCGGCTTCT CGTGGCTACA CGAGGGGTGG TGGCGTTGCC CCAACTGCGG CGCCGAGGGG 
CGTCAAAACT TCGACGTATA TATAAGAGAG GGGCTGGAGG GGGCCGTGTT CTATAGGTGC 
AGGAGGTGCG GCTTCGCCTA CGTGGAATAC CAGGGCCTGC CCCGGGAGGA CTTGGAATAC 
CTCTTGAGAA TTGTGGTGGG CCATGTGGCG GGAGGTCAAC GGGATTAA 

 

Protein sequence

MSKEVEIVCG GDSHCVEEVR RAVEEIRSLF STPIPEPHLS SLSPPLVDQV ANMAEIVDAV 
GDEAAARLVV ASRLAKRFAQ RFAEWSGDRC PICGSAPRLF VVVPRPGEIF ESRERYAKCV 
CGFSWLHEGW WRCPNCGAEG RQNFDVYIRE GLEGAVFYRC RRCGFAYVEY QGLPREDLEY 
LLRIVVGHVA GGQRD