Gene Dvul_2375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2375 
Symbol 
ID4662588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2772118 
End bp2772999 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content63% 
IMG OID639820623 
Productformate dehydrogenase formation protein FdhE, putative 
Protein accessionYP_967818 
Protein GI120603418 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3058] Uncharacterized protein involved in formate dehydrogenase formation 
TIGRFAM ID[TIGR01562] formate dehydrogenase accessory protein FdhE 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.826547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATATG ATGTCGATGA TGCGCTGAAG CGTCTTGAGC GCAAGCTCAA GGCCCTGCGC 
GCCAAGAACT ACATTCCCGA TTCGCTGCTG GAGATCGTGG CACGCACCGC AGCCATGCAG
GCCGATGCGA GGGCCCGTGT CAGTGTGGCC CTGCCTGAAG GGCTGGCCAC TCCCGATGCC
CATGTCCAGG GTGCCCCCTT GCTTGCGCGT GATGCCTTTC CCTACGACAG GGCCGTGACC
GCGCAACTCT TCGGGCGTCT TCTCGCCATG CTGCATGCCG CGGGCGGAAG TCTCGGCATG
TCGGCAGACG CATTCAAGGC AAGGCTTGAG GCTGGCGAAG TGACGCTCGA GGCCCTGTGT
GACGCCATGT TGCGTGATGA CGAGGCGTTC TTCGAGGCAT GGGCAGGGAA GATGCCCGAG
GCACCCAGCC TCGTGCGATT TCTCGCGCTC GGCAGCCTCG TGCCGTCGCT TGAGGCTGTC
GCCTCGCTGC TGGCACTGAA CCATGACCCC GAAAGCGTAT GGCAGCATGG GCACTGTCCG
CTGTGCGGCA GCGCGCCTCT CATCTCCCGC ATCGCGGGCA AGGAGGGGGC ACGGTACAGC
ACCTGCTCGT TCTGTCGCCA CGAATACCGT ACTGCGCGAC TCCAGTGTCC CTTCTGCCTC
GAAACCGCGG CGGAGAAGCT CGAGTATTTC ACAGCCGACG GTGAACCGGG CTATCAGGTG
CATGTGTGCC GTTCTTGCGA CAGCTACATC AAGCTGGCCG ACTTCAGGGA ATACGACCGC
GAGTCCATCC CGGTGCTGGA CGACCTTGAA TCGCTGGCGC TGGACATCCT CGCACGACAG
CAGGGTTTTT CGCGTCCGAC GGCCTCGGCG TGGGGGTTCT AG
 
Protein sequence
MSYDVDDALK RLERKLKALR AKNYIPDSLL EIVARTAAMQ ADARARVSVA LPEGLATPDA 
HVQGAPLLAR DAFPYDRAVT AQLFGRLLAM LHAAGGSLGM SADAFKARLE AGEVTLEALC
DAMLRDDEAF FEAWAGKMPE APSLVRFLAL GSLVPSLEAV ASLLALNHDP ESVWQHGHCP
LCGSAPLISR IAGKEGARYS TCSFCRHEYR TARLQCPFCL ETAAEKLEYF TADGEPGYQV
HVCRSCDSYI KLADFREYDR ESIPVLDDLE SLALDILARQ QGFSRPTASA WGF