| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0645 |
|---|
| Symbol | |
|---|
| ID | 7172532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 774920 |
|---|
| End bp | 775933 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643539145 |
|---|
| Product | formate dehydrogenase accessory protein |
|---|
| Protein accession | YP_002435070 |
|---|
| Protein GI | 218885749 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3058] Uncharacterized protein involved in formate dehydrogenase formation |
|---|
| TIGRFAM ID | [TIGR01562] formate dehydrogenase accessory protein FdhE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 0.0493202 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACG CTGCCCCCTC CCTCTCCGGC ACCACCTCCG AAACCCTCGA CCGCCTGCTG
GCCCGCCACC CCGAACACGC GCCGCTCATC GCCGCGTTCC GCGCGCTCAG CGTGGCCCAG
GCGGAACTGG CGGAGATGGC CGACCCCGTC GGTGCGGTCC CCGTGCCCCC GGTGCGGGTG
GAACCCGATC TTTTCGCGCA GGGCCGCGCC CTACTGCCCG CCGATGAACT GCCCGACGGC
CCCGCGCTGG ACGACGCCTT CCTGGCCCAT GCCCTGGCCC TGCTGGCCCC GGCCATCGCC
GCCGGGCTGC CCGCCGTGGC GGACGACGTG CGCGAACTGG CCCGACTGAT GCAACTGGCC
CCGACAAAGG AAGGGACGTC GGACGGGAAG CAGGACACGG CGCAAGACGA CAGCCAGCAC
CCCCTGCCCC GCCAACTGGC GGCATGGGCG CTGACCGGTC GCATCGCCGC CGCCCAGCAA
TGGGCGCGCC GGGCCGGACT TTCGCCCGAC GCCGTGGGTT TCGTGGCCAT GCAACTGGCC
ACTGCGGTCG CCCGCCGGGT GCAGCGTGCC GTGGCCCCGT CTCTTGCCCC GCATGCCGAA
GACTGGACCC ACGGCCACTG TCCGGTATGC GGCACGGCCC CCAAGCTGGG GGTGCTGCGC
GGTGAAGGCG GCCAGCGCTG GCTGGTCTGT GCGCTGTGCG ACCACACCTG GCGCCATCAG
CGCACCGCCT GCCCCTTCTG CGGGGTGGAC AAGCCGGACA ACATCACCCT GCGCTACGTG
CAGGGGTTCG AGGACGAACG CGCCGAGGCC TGCGCCTCCT GCCGCCGGTA CATTCTGGCG
GCGGACCTGC GCCACCGCAC CAGCGACGTG CCCTCGGTGC TGCCGCTGGG CATGGCCCAC
CTGGACATGC TGTTGCAGGA AAAGGGCTTC CTGCCGGGCG GCGTGGACGA CACCACGCGG
CCCGCCCGAA CAGGCGGTTC AGGCAAGGCA CCCGGCGCAA AAACCTCAGC CTGA
|
|---|
| Protein sequence | MPDAAPSLSG TTSETLDRLL ARHPEHAPLI AAFRALSVAQ AELAEMADPV GAVPVPPVRV
EPDLFAQGRA LLPADELPDG PALDDAFLAH ALALLAPAIA AGLPAVADDV RELARLMQLA
PTKEGTSDGK QDTAQDDSQH PLPRQLAAWA LTGRIAAAQQ WARRAGLSPD AVGFVAMQLA
TAVARRVQRA VAPSLAPHAE DWTHGHCPVC GTAPKLGVLR GEGGQRWLVC ALCDHTWRHQ
RTACPFCGVD KPDNITLRYV QGFEDERAEA CASCRRYILA ADLRHRTSDV PSVLPLGMAH
LDMLLQEKGF LPGGVDDTTR PARTGGSGKA PGAKTSA
|
|---|
| |