| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0105 |
|---|
| Symbol | |
|---|
| ID | 4477253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 120156 |
|---|
| End bp | 121064 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639724624 |
|---|
| Product | formate dehydrogenase accessory protein FdhE |
|---|
| Protein accession | YP_867755 |
|---|
| Protein GI | 117918563 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3058] Uncharacterized protein involved in formate dehydrogenase formation |
|---|
| TIGRFAM ID | [TIGR01562] formate dehydrogenase accessory protein FdhE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATA CAGCCGAGAT ACCTATGGTC CCCGGCAGCG AATCGCCGCT GGAGCTTAAA
CCCTTAAAGG CGGTGGACCC TAAAACTGTG TATCACAGAC GGGCGCAGCG TTTGTTGTCG
TTGGCCAAGG ACTCGCCGCT GGCCGACTAC TTTGAGCTAT GCCGCCGTGT GGTTGCGATT
CAGGCCAGAT TGGCGGCGGA GGCTGACTTC GGTCAGCTTC TCGCTTGGGG GAAAGATGAA
GCGATTCCGC TTTCCCACTT GGGTTCAGAG GCAGATAGCT ACTGGCAAGG ACTGCTACAA
CAACTGTTAA GCGATCTGCT GCCGCAGGTG GATGAGGATA TGGCGCGAGT GCTGCGTTTG
TTGATGCAGC AATCTCCAGA GCAACTCACC TCCTGGGGCA GTGCACTGCG TCAGGGACAT
ATGAGCGAAG TCCCCGCACG CTTCAGTTTG TTTATCTGGG CGGCGATGGG GGTCTACTGG
TCCCATTGGG CACCTATGGT GATTAAACGG ATCGATCAAC GCAAAGTCGT GCAGCAGAAC
CTATGCCCGA TTTGCGGCTG TCATCCTGTG GCGAGCGTAA TCGTCGACCA GCCGCGAGCG
GGTCTGCGTT ATCTGCATTG CAGTTTGTGC GAGAGCGAAT GGCATTACAT TCGCGCCCAC
TGCACTAGCT GCGGTCAGGA TAAAGGGACG ACGCTCTGGT CATTCGATGA TGCTAAGGCG
CAGGTGCGCA TCGAGAGCTG CGATGAATGC CATGGTTACA CCAAGATGCT GTTCGTCGAA
AAGTCACCGC TGATGGATGT GGCGGCCGAC GACTTAGCGA CCCTGATGCT CGACAGTGAG
CTAAATGCCA AGGGCTTTGG GGCGACCACT GTCAATCCAT TGCTACTGGC CCACGAAACT
GAGCAATAA
|
|---|
| Protein sequence | MSHTAEIPMV PGSESPLELK PLKAVDPKTV YHRRAQRLLS LAKDSPLADY FELCRRVVAI
QARLAAEADF GQLLAWGKDE AIPLSHLGSE ADSYWQGLLQ QLLSDLLPQV DEDMARVLRL
LMQQSPEQLT SWGSALRQGH MSEVPARFSL FIWAAMGVYW SHWAPMVIKR IDQRKVVQQN
LCPICGCHPV ASVIVDQPRA GLRYLHCSLC ESEWHYIRAH CTSCGQDKGT TLWSFDDAKA
QVRIESCDEC HGYTKMLFVE KSPLMDVAAD DLATLMLDSE LNAKGFGATT VNPLLLAHET
EQ
|
|---|
| |