| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0279 |
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| Symbol | |
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| ID | 8418083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 342354 |
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| End bp | 343238 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645036844 |
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| Product | formate dehydrogenase accessory protein |
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| Protein accession | YP_003197159 |
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| Protein GI | 258404417 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3058] Uncharacterized protein involved in formate dehydrogenase formation |
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| TIGRFAM ID | [TIGR01562] formate dehydrogenase accessory protein FdhE |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCC AACTGGAACG TGAACAACGG CGACTGGAAC GGAAAATAGA GGCGTTGCGC
GGCAGAGAGG ATCTGCCCGA GCCGGTGGTC GATTTGGTGG CTGCGTTGGC CCGCCTCCAG
CTTGAGGCGA TCAGCACGGC CGAGGCCGAG GTCCCGTCCA AGCAGGACAT GGCTTCAGCA
GAGATGGTCC TGCAAGGGGC GCCTCTGTGG CCGCGGGAAT CGTTCGCCGT TGATTTGAAA
CAAAGCCGGG AACTGGCGGG AAAGGTGCTG GATCTTTTAG CCGAAACCGG AGAACGGAAT
GCCGATGCTG CGGCCACGCT GCGCCGCGCA CTGGAAAGCG GGGAACTGGA CTGGGCCGAG
GCCGTGAATA AGCTCATCAT GGCCGATGAC AGTTTTTTTC AGACGTGGGC CGAACAGACG
CCGGACGCCC CGGACGCCTT GCGTTTTGTG ATCCAGGCCT CCATCACCCC CAGCCTCCAG
GCTGTGGCTA TGGGGGTTGA TGAACAGCGG GAAAAAGGGA CCTGGATCCA CGGACATTGC
CCTGTTTGCG GGTCCTTGCC CCTGATTGGC CATTTGGAAG GCAAAGAAGG GCAGCAGCAT
TTCACGTGCG CTTTTTGTCG CACCGCGTAT CGCAGCAAGC GGCTCATGTG TCCCTTTTGC
GGTGAACAGG ACCACACCAA GTTGAGCTAT TTCTATGCCG ACGAGGAACC CGGCTTCCAG
GTCCATGTTT GTGAGAGTTG CAAGATGTAT TTCAAGGATG TCGATTTCAG AGAACTCGAT
CGGACCTCCG TGCCGGTCCT GGATGATCTG GAATCGCTGG TCATGGATAT GTTGGCCCAG
GAAAAGGGCT ACGTGCGCCC CGTGCCGTCG GCCTGGGGAT TTTAG
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| Protein sequence | MAFQLEREQR RLERKIEALR GREDLPEPVV DLVAALARLQ LEAISTAEAE VPSKQDMASA
EMVLQGAPLW PRESFAVDLK QSRELAGKVL DLLAETGERN ADAAATLRRA LESGELDWAE
AVNKLIMADD SFFQTWAEQT PDAPDALRFV IQASITPSLQ AVAMGVDEQR EKGTWIHGHC
PVCGSLPLIG HLEGKEGQQH FTCAFCRTAY RSKRLMCPFC GEQDHTKLSY FYADEEPGFQ
VHVCESCKMY FKDVDFRELD RTSVPVLDDL ESLVMDMLAQ EKGYVRPVPS AWGF
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