Gene Acid345_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0456 
Symbol 
ID4071703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp547220 
End bp548068 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content59% 
IMG OID637982460 
Producthypothetical protein 
Protein accessionYP_589535 
Protein GI94967487 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3058] Uncharacterized protein involved in formate dehydrogenase formation 
TIGRFAM ID[TIGR01562] formate dehydrogenase accessory protein FdhE 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.624877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACC GAGATGCCTG GCTCGCTCGT CATCCTTATC TCGTTGCACT CGCAGACCTC 
GATGCCAACG TGCGCAGTAC CCTTGACGGC ATTGGCATTG CGCCAGCAGC CACGCCCAAC
TTCGAGGACT ATCGCGCCGA GTACAAATCC GGTGTGCCGC TGCTTCACAG CTCCGCTCTC
GTTTTCGATG TCGAAGCTCC AACCAGCTTT CTGCTGGAGC TCATCGAACG CCTATCGCGA
CGCTCCGATA TCGGAGAACT AGCCCCGCAA TGCTGGGAGC TGCATGCGCA GTTCTCGATG
GATCATGGCA GTGCTGCGCG AGCCATGGCT GCACTGCTTC ATCGGACAGA CGAATCGGAA
GCCCAGATCG GTGTACTTCG CTTCCTCGCA TGGAAACTCA TGCGAGTTTA TTTCTCGCCA
ATGTTGAGGT CCTTCGATGC CTGGCGCCCT GAAGAGCAAT GGCTTCTCAG CTACTGCCCC
GTATGCGCGT CGCTTCCAAC TATGGCTCAA CTCACCGGCC AGGAGCCAGG CCGAATGCGG
CACCTGCATT GTCCATGCTG CGGCACGCGT TGGCGGTTCC GGCGGACCGG CTGCCCCTTC
TGCGAACGAG AAGATGATCA TCGACTGGCG GTGATTGCAA TCGAAGGCGA AGGCGGGCTG
CGCCTGGACC ACTGCGATTC ATGCCAGGGC TATCTCAAGA CTTACGATGG AGAGGGAAAC
GAAGCCTTGC TTTTGTCCGA TTGGGCGTCC CTGCACATTG ATGTGCTGGC AAACGACCGG
GGACTGCGAA GCTTGGGTGC GCCTCTCTTC GACCTCGCGG CACTGAGTCA AATCGCGAGC
GGCACCTAG
 
Protein sequence
MLNRDAWLAR HPYLVALADL DANVRSTLDG IGIAPAATPN FEDYRAEYKS GVPLLHSSAL 
VFDVEAPTSF LLELIERLSR RSDIGELAPQ CWELHAQFSM DHGSAARAMA ALLHRTDESE
AQIGVLRFLA WKLMRVYFSP MLRSFDAWRP EEQWLLSYCP VCASLPTMAQ LTGQEPGRMR
HLHCPCCGTR WRFRRTGCPF CEREDDHRLA VIAIEGEGGL RLDHCDSCQG YLKTYDGEGN
EALLLSDWAS LHIDVLANDR GLRSLGAPLF DLAALSQIAS GT