Gene Dred_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1117 
Symbol 
ID4958609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1187276 
End bp1188085 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content43% 
IMG OID640180287 
Producthypothetical protein 
Protein accessionYP_001112477 
Protein GI134298981 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3058] Uncharacterized protein involved in formate dehydrogenase formation 
TIGRFAM ID[TIGR01562] formate dehydrogenase accessory protein FdhE 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACGA AGAAAAATGC AGAGAAATTA GCCAACTTTT ATCTAGATAT AATGGAACAA 
GAAAATGAAT TTGAAGCATT AGAGTGGAAA ATAGATTTAG ACTCTGAACA AGTGATTCGG
TGGTATCAAG GGGAAGCGGC TCTTTCTTTG GCGGCACCGG ACATTCCAGA AGAAATTGTA
TTTAATCGGT TTATTAATGT GGCCCGGGCC TGTCAGAAAT GGCAGGTCGG ACCACTGCCT
GTTACTAATG AGTTTATAAA CAACCTAGAA AGACTTAATG ATTCCAAAAG GAAGGAGTTT
ATAAACGCAT TATTTAAAGT GGCAGGAAAC AAGGCTTGGA TCAAAGGACT AAATGTATCC
CCAGAGTTTC TTGATTTTAT AGCGCAAATT ACCTTTAAAC CCATTCTAAA TGCCTATGGG
GAGGCCGTAC TAGACAAAGT TGAGTTGGAT AAATGGTCCC ATAGCCATTG TCCCGTTTGT
GGAGATCAAC CTATTATGGC CAAGTTCTCC GGCAAAGAAG GCTATCGAAT ACTTCATTGT
GGGCGATGTG AGACCGAATG GCGCTATAAG CGGCTGGGTT GCCCCTACTG CAAAGAAGAA
AATGCTTCCC AGGCAACCTT TATAACAATG GAAGATTTTA AGCAATATCG GGTCTACTTA
TGTGAACGGT GTAAAAGTTA TTTGAAGACG GTGGACGAGC GGTTGGCCGG GGAAGTGGAT
CTGTTTTGTG AAGATTTAGC CACTGTTGAG TTAGATCGGT TGGCCCAGGC TGAAGGTTAT
CAGCGGGGCC ATAGGCGGCA ACAAACCTAA
 
Protein sequence
METKKNAEKL ANFYLDIMEQ ENEFEALEWK IDLDSEQVIR WYQGEAALSL AAPDIPEEIV 
FNRFINVARA CQKWQVGPLP VTNEFINNLE RLNDSKRKEF INALFKVAGN KAWIKGLNVS
PEFLDFIAQI TFKPILNAYG EAVLDKVELD KWSHSHCPVC GDQPIMAKFS GKEGYRILHC
GRCETEWRYK RLGCPYCKEE NASQATFITM EDFKQYRVYL CERCKSYLKT VDERLAGEVD
LFCEDLATVE LDRLAQAEGY QRGHRRQQT