| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1815 |
|---|
| Symbol | |
|---|
| ID | 3568011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 1950902 |
|---|
| End bp | 1951810 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637680286 |
|---|
| Product | formate dehydrogenase accessory protein |
|---|
| Protein accession | YP_285031 |
|---|
| Protein GI | 71907444 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3058] Uncharacterized protein involved in formate dehydrogenase formation |
|---|
| TIGRFAM ID | [TIGR01562] formate dehydrogenase accessory protein FdhE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 0.608787 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.064168 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCC AACCGATCGA TTTCCATCCG CCGGCCGAAG AGGCTGCACC CTACCTGTTA
CCGAATCCCG GTTCGATTTT TGCCGACCGC GCCGCGCGCT TTGCCGCACT GGCTGAAGAA
CACAGCCTGG GGGACTGGCT CCGCTTTCTT GGCCAACTCA GCCAGGCCCA GCACGAAATC
CTGAAAGGCA TACCCACGCT GCCCTTGCCC GACGCGGCCA GCCTCGAACA GGCGCGCACC
CACGGCATGC CACCGCTCAA CGCGTCTTCC CTGAGCCGCC CTACAGCCTG GCGCTTTGCG
CTGCAGCAAC TGGCCCTGCG CCTTGAAAAA ACCGCCCCCG AAGGTGCGAA AAAAGCGCTC
AAAGGCTTGT TTTCCGCCAG CGATGCCGAT CTGGAAAAAC TGGCCGACAT GCTGCTGACC
GGCGAGCCCG ATAGCGAATA CGCCGCCCAA CTGCCCTTCG TCGCGGCCGC CCTGCAAATT
GTCTTCACGG CGCTGGCCAG CCAGCTCGAT GCCCAACAGC TTCAACCGCT TGATGCCCAT
GGCGTCTGCC CCTGCTGCGG CAGCCTGCCG GTCGCCAGCG TCGTGCGTCT GGGCGCCACG
ATCAACAACC TGCGCTACCT GCACTGCTCG CTGTGCAATA CCGAATGGAA TGTTCCTCGT
GCCACCTGCA CCGCCTGCAA TACCGACAAG GGCGTGGCCC TGCATGAAGT CGAGGGCAGC
AAGGGTGCCG TCCGCGCCGA AACCTGCGAT GCCTGCAAGA GCTACCTGAA AATCGTCTAT
CAGGAGAAAG ACCCGCGCGT TGATCCGGTC GCCGACGACC TCGCCACACT GGCGCTCGAC
ATGCTGGTCG ACGAAGCCGG CTACGAACGC TCCGGCCCCA ACCTGTTGCT GATCGGCGCC
AACGCTTAA
|
|---|
| Protein sequence | MQTQPIDFHP PAEEAAPYLL PNPGSIFADR AARFAALAEE HSLGDWLRFL GQLSQAQHEI
LKGIPTLPLP DAASLEQART HGMPPLNASS LSRPTAWRFA LQQLALRLEK TAPEGAKKAL
KGLFSASDAD LEKLADMLLT GEPDSEYAAQ LPFVAAALQI VFTALASQLD AQQLQPLDAH
GVCPCCGSLP VASVVRLGAT INNLRYLHCS LCNTEWNVPR ATCTACNTDK GVALHEVEGS
KGAVRAETCD ACKSYLKIVY QEKDPRVDPV ADDLATLALD MLVDEAGYER SGPNLLLIGA
NA
|
|---|
| |