95 homologs were found in PanDaTox collection
for query gene Dred_0144 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_0144  methyl-viologen-reducing hydrogenase, delta subunit  100 
 
 
66 aa  135  1e-31  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1278  methyl-viologen-reducing hydrogenase delta subunit  87.5 
 
 
144 aa  123  7e-28  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.264877 
 
 
-
 
NC_008554  Sfum_1973  methyl-viologen-reducing hydrogenase, delta subunit  71.21 
 
 
143 aa  109  1.0000000000000001e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_2015  methyl-viologen-reducing hydrogenase delta subunit  70.97 
 
 
146 aa  105  2e-22  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1784  methyl-viologen-reducing hydrogenase delta subunit  66.67 
 
 
270 aa  103  9e-22  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1174  methyl-viologen-reducing hydrogenase, delta subunit  70.77 
 
 
77 aa  102  1e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.339805 
 
 
-
 
NC_012918  GM21_0028  methyl-viologen-reducing hydrogenase delta subunit  62.12 
 
 
193 aa  102  1e-21  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_3014  methyl-viologen-reducing hydrogenase, delta subunit  72.58 
 
 
252 aa  101  3e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.123543  normal  0.362097 
 
 
-
 
NC_010424  Daud_1653  methyl-viologen-reducing hydrogenase, delta subunit  66.13 
 
 
146 aa  101  3e-21  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.531476  n/a   
 
 
-
 
NC_010803  Clim_1199  methyl-viologen-reducing hydrogenase delta subunit  69.35 
 
 
149 aa  101  3e-21  Chlorobium limicola DSM 245  Bacteria  normal  0.461451  n/a   
 
 
-
 
NC_008554  Sfum_2972  methyl-viologen-reducing hydrogenase, delta subunit  72.58 
 
 
252 aa  101  3e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.13558  normal 
 
 
-
 
NC_009483  Gura_3584  methyl-viologen-reducing hydrogenase, delta subunit  66.13 
 
 
188 aa  101  4e-21  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0148  methyl-viologen-reducing hydrogenase, delta subunit  66.13 
 
 
161 aa  100  5e-21  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1332  methyl-viologen-reducing hydrogenase delta subunit  62.12 
 
 
146 aa  100  8e-21  Ammonifex degensii KC4  Bacteria  normal  0.931866  n/a   
 
 
-
 
NC_007517  Gmet_3427  methyl-viologen-reducing hydrogenase, delta subunit  67.74 
 
 
168 aa  99.8  1e-20  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0029  methyl-viologen-reducing hydrogenase delta subunit  64.52 
 
 
175 aa  99.8  1e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1259  methyl-viologen-reducing hydrogenase, delta subunit  67.74 
 
 
149 aa  99.8  1e-20  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0865  methyl-viologen-reducing hydrogenase delta subunit  62.9 
 
 
166 aa  99  2e-20  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_1110  hydrogenase, methyl-violgen-reducing type, delta subunit  66.13 
 
 
149 aa  99  2e-20  Chlorobium luteolum DSM 273  Bacteria  normal  0.906515  normal  0.318255 
 
 
-
 
NC_002939  GSU0089  heterodisulfide reductase subunit  66.13 
 
 
166 aa  99.4  2e-20  Geobacter sulfurreducens PCA  Bacteria  normal  0.633764  n/a   
 
 
-
 
NC_011060  Ppha_1305  methyl-viologen-reducing hydrogenase delta subunit  66.13 
 
 
149 aa  98.6  3e-20  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_1030  hydrogenase, methyl-violgen-reducing type, delta subunit  66.13 
 
 
149 aa  98.6  3e-20  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.485491  n/a   
 
 
-
 
NC_009051  Memar_0622  methyl-viologen-reducing hydrogenase, delta subunit  67.74 
 
 
141 aa  97.8  4e-20  Methanoculleus marisnigri JR1  Archaea  normal  0.316119  n/a   
 
 
-
 
NC_013216  Dtox_1354  methyl-viologen-reducing hydrogenase delta subunit  62.9 
 
 
144 aa  97.8  4e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.774154  normal  0.442745 
 
 
-
 
NC_009634  Mevan_0072  methyl-viologen-reducing hydrogenase delta subunit  64.06 
 
 
140 aa  97.4  6e-20  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_010424  Daud_0566  methyl-viologen-reducing hydrogenase, delta subunit  62.5 
 
 
144 aa  96.7  9e-20  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1803  methyl-viologen-reducing hydrogenase, delta subunit  62.9 
 
 
67 aa  96.7  1e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.538319 
 
 
-
 
NC_009135  MmarC5_0650  F420-non-reducing hydrogenase subunit D  61.54 
 
 
140 aa  95.5  2e-19  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_010718  Nther_2661  F420-non-reducing hydrogenase subunit D  64.52 
 
 
144 aa  95.1  3e-19  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1976  methyl-viologen-reducing hydrogenase, delta subunit  64.52 
 
 
67 aa  94.7  4e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009635  Maeo_0099  methyl-viologen-reducing hydrogenase delta subunit  59.09 
 
 
141 aa  94.7  4e-19  Methanococcus aeolicus Nankai-3  Archaea  normal  0.585779  n/a   
 
 
-
 
NC_009253  Dred_1329  methyl-viologen-reducing hydrogenase, delta subunit  58.46 
 
 
150 aa  94.4  5e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0829  methyl-viologen-reducing hydrogenase, delta subunit  65.08 
 
 
494 aa  94.4  5e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  0.330153  normal 
 
 
-
 
NC_008553  Mthe_1576  methyl-viologen-reducing hydrogenase, delta subunit  63.93 
 
 
791 aa  93.6  7e-19  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_008554  Sfum_2148  methyl-viologen-reducing hydrogenase, delta subunit  66.13 
 
 
161 aa  93.6  9e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_0552  CoB--CoM heterodisulfide reductase subunit A  57.38 
 
 
786 aa  93.2  1e-18  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0563725  n/a   
 
 
-
 
NC_011832  Mpal_2238  methyl-viologen-reducing hydrogenase delta subunit  57.81 
 
 
142 aa  91.7  3e-18  Methanosphaerula palustris E1-9c  Archaea  normal  0.410649  normal  0.0380736 
 
 
-
 
NC_013173  Dbac_0851  methyl-viologen-reducing hydrogenase delta subunit  65.08 
 
 
163 aa  91.7  3e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2589  CoB--CoM heterodisulfide reductase subunit A  61.9 
 
 
792 aa  91.3  4e-18  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.295963 
 
 
-
 
NC_008942  Mlab_0242  F420-non-reducing hydrogenase subunit D  60.94 
 
 
142 aa  91.3  4e-18  Methanocorpusculum labreanum Z  Archaea  normal  0.307195  normal  0.214233 
 
 
-
 
NC_007519  Dde_3527  hydrogenase, iron-sulfur cluster-binding subunit, putative  61.9 
 
 
154 aa  91.3  4e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3678  methyl-viologen-reducing hydrogenase delta subunit  59.68 
 
 
190 aa  90.9  5e-18  Opitutus terrae PB90-1  Bacteria  normal  0.358759  normal  0.441144 
 
 
-
 
NC_009712  Mboo_0587  methyl-viologen-reducing hydrogenase, delta subunit  59.68 
 
 
152 aa  90.9  5e-18  Candidatus Methanoregula boonei 6A8  Archaea  hitchhiker  0.000161599  normal  0.0317358 
 
 
-
 
NC_011883  Ddes_2101  methyl-viologen-reducing hydrogenase delta subunit  63.49 
 
 
482 aa  90.9  5e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.212274  n/a   
 
 
-
 
NC_008554  Sfum_3957  methyl-viologen-reducing hydrogenase, delta subunit  59.38 
 
 
65 aa  90.9  5e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0325  methyl-viologen-reducing hydrogenase delta subunit  58.73 
 
 
501 aa  90.9  6e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.393409 
 
 
-
 
NC_008346  Swol_0398  heterodisulfide reductase subunit  55.38 
 
 
70 aa  90.5  7e-18  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_1842  methyl-viologen-reducing hydrogenase, delta subunit  59.38 
 
 
140 aa  90.1  8e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013165  Shel_17780  coenzyme F420-reducing hydrogenase, delta subunit  58.06 
 
 
173 aa  89  2e-17  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_1839  methyl-viologen-reducing hydrogenase, delta subunit  59.68 
 
 
140 aa  89  2e-17  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013223  Dret_0195  methyl-viologen-reducing hydrogenase delta subunit  63.33 
 
 
148 aa  88.2  4e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2314  methyl-viologen-reducing hydrogenase delta subunit  63.33 
 
 
148 aa  88.2  4e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0823  methyl-viologen-reducing hydrogenase, delta subunit  54.55 
 
 
140 aa  88.2  4e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.400566 
 
 
-
 
NC_013223  Dret_0420  methyl-viologen-reducing hydrogenase delta subunit  54.55 
 
 
139 aa  86.3  1e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.440968 
 
 
-
 
NC_009675  Anae109_4307  methyl-viologen-reducing hydrogenase delta subunit  54.55 
 
 
488 aa  84.7  4e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.340367 
 
 
-
 
NC_008554  Sfum_2154  methyl-viologen-reducing hydrogenase, delta subunit  54.84 
 
 
153 aa  82  0.000000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2347  methyl-viologen-reducing hydrogenase delta subunit  53.12 
 
 
141 aa  81.6  0.000000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4293  methyl-viologen-reducing hydrogenase delta subunit  55.56 
 
 
486 aa  81.3  0.000000000000005  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_0979  methyl-viologen-reducing hydrogenase delta subunit  54.84 
 
 
148 aa  79  0.00000000000002  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.000000000116298  n/a   
 
 
-
 
NC_013385  Adeg_0343  methyl-viologen-reducing hydrogenase delta subunit  54.84 
 
 
141 aa  79  0.00000000000002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3535  methyl-viologen-reducing hydrogenase, delta subunit  54.84 
 
 
152 aa  79.3  0.00000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_4163  methyl-viologen-reducing hydrogenase, delta subunit  53.97 
 
 
491 aa  79.3  0.00000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.106398  n/a   
 
 
-
 
NC_013216  Dtox_1283  methyl-viologen-reducing hydrogenase delta subunit  50 
 
 
147 aa  78.2  0.00000000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.475026 
 
 
-
 
NC_007644  Moth_1193  methyl-viologen-reducing hydrogenase, delta subunit  53.03 
 
 
152 aa  77.8  0.00000000000004  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2806  methyl-viologen-reducing hydrogenase delta subunit  46.88 
 
 
255 aa  77.4  0.00000000000005  Geobacter sp. M21  Bacteria  n/a    normal  0.515421 
 
 
-
 
NC_009943  Dole_1158  methyl-viologen-reducing hydrogenase delta subunit  45.16 
 
 
89 aa  75.9  0.0000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1425  methyl-viologen-reducing hydrogenase delta subunit  50.85 
 
 
810 aa  75.5  0.0000000000002  Ammonifex degensii KC4  Bacteria  normal  0.0494363  n/a   
 
 
-
 
NC_011891  A2cp1_4315  methyl-viologen-reducing hydrogenase delta subunit  53.97 
 
 
489 aa  76.3  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0971  methyl-viologen-reducing hydrogenase delta subunit  45.16 
 
 
134 aa  70.5  0.000000000008  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_013223  Dret_2260  methyl-viologen-reducing hydrogenase delta subunit  45.45 
 
 
807 aa  70.1  0.00000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009975  MmarC6_0975  methyl-viologen-reducing hydrogenase delta subunit  45.16 
 
 
134 aa  70.1  0.00000000001  Methanococcus maripaludis C6  Archaea  normal  0.212416  n/a   
 
 
-
 
NC_009135  MmarC5_1710  methyl-viologen-reducing hydrogenase, delta subunit  45.16 
 
 
134 aa  70.1  0.00000000001  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0998  methyl-viologen-reducing hydrogenase delta subunit  45.16 
 
 
134 aa  68.6  0.00000000002  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_010424  Daud_0115  methyl-viologen-reducing hydrogenase, delta subunit  48.39 
 
 
173 aa  66.6  0.00000000009  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_1213  methyl-viologen-reducing hydrogenase delta subunit  43.55 
 
 
64 aa  66.6  0.0000000001  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_013385  Adeg_0907  methyl-viologen-reducing hydrogenase delta subunit  41.38 
 
 
160 aa  57.8  0.00000005  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1003  methyl-viologen-reducing hydrogenase delta subunit  39.66 
 
 
160 aa  57  0.00000008  Ammonifex degensii KC4  Bacteria  normal  0.548422  n/a   
 
 
-
 
NC_007519  Dde_1210  hydrogenase, iron-sulfur cluster-binding subunit, putative  63.41 
 
 
141 aa  56.6  0.0000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1078  methyl-viologen-reducing hydrogenase delta subunit  40.62 
 
 
744 aa  51.2  0.000005  Ammonifex degensii KC4  Bacteria  normal  0.462282  n/a   
 
 
-
 
NC_008554  Sfum_0013  methyl-viologen-reducing hydrogenase, delta subunit  36.21 
 
 
540 aa  49.7  0.00001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.779838 
 
 
-
 
NC_010424  Daud_0878  methyl-viologen-reducing hydrogenase, delta subunit  41.94 
 
 
145 aa  48.1  0.00003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.340433  n/a   
 
 
-
 
NC_008554  Sfum_1793  methyl-viologen-reducing hydrogenase, delta subunit  47.37 
 
 
114 aa  48.5  0.00003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.944587 
 
 
-
 
NC_008554  Sfum_3132  methyl-viologen-reducing hydrogenase, delta subunit  46.15 
 
 
118 aa  48.1  0.00004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1647  heterodisulfide reductase, subunit A  29.03 
 
 
752 aa  45.8  0.0002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0109393  normal 
 
 
-
 
NC_009943  Dole_1000  methyl-viologen-reducing hydrogenase delta subunit  34.38 
 
 
778 aa  45.8  0.0002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1835  methyl-viologen-reducing hydrogenase delta subunit  35.59 
 
 
750 aa  45.8  0.0002  Chlorobium phaeobacteroides BS1  Bacteria  unclonable  0.0000152117  normal  0.0275614 
 
 
-
 
NC_008554  Sfum_1050  methyl-viologen-reducing hydrogenase, delta subunit  37.5 
 
 
739 aa  45.1  0.0004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0896174 
 
 
-
 
NC_010424  Daud_1883  methyl-viologen-reducing hydrogenase, delta subunit  31.25 
 
 
735 aa  43.5  0.001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.692001  n/a   
 
 
-
 
NC_009253  Dred_0639  methyl-viologen-reducing hydrogenase, delta subunit  31.25 
 
 
718 aa  43.5  0.001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0790  methyl-viologen-reducing hydrogenase, delta subunit  34.85 
 
 
700 aa  43.1  0.001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1286  methyl-viologen-reducing hydrogenase, delta subunit  31.25 
 
 
738 aa  42.7  0.001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.499406  normal 
 
 
-
 
NC_007644  Moth_0442  methyl-viologen-reducing hydrogenase, delta subunit  39.39 
 
 
136 aa  43.1  0.001  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1453  4Fe-4S ferredoxin, iron-sulfur binding  32.76 
 
 
1067 aa  43.1  0.001  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.551419 
 
 
-
 
NC_013216  Dtox_3575  methyl-viologen-reducing hydrogenase delta subunit  30.77 
 
 
736 aa  41.6  0.004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_1583  heterodisulfide reductase, subunit A/hydrogenase, delta subunit, putative  32.2 
 
 
750 aa  41.2  0.004  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.120399  n/a   
 
 
-
 
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