Gene Dtox_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1278 
Symbol 
ID8428226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1300381 
End bp1300815 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content44% 
IMG OID645033618 
Productmethyl-viologen-reducing hydrogenase delta subunit 
Protein accessionYP_003190783 
Protein GI258514561 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.264877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTCAA AGGAATTTGA ACCCAAAATA ATTGCCTTTC TCTGCAACTG GTGTAGTTAC 
GCCGGTGCAG ATTTGGCTGG TGTTGGCAGA ATTCAGTATC CTCCCAACAT TCGTGTAATT
CGTATACCTT GTTCCGGTAG AATTAATCCC CTCTTCATTT TTGCCGGGTT AAGAAGCGGA
GCAGACGCGA TTTTAACATC TGGGTGACAC CCTGGTGACT GTCACTATGT TAGTGGCAAT
CTTGTAGCAC GTAGGAAATT TGCGCTTATG AAAAGCCTTT TGGATTTCAT GGGTGTTGAA
GAAGATAGGG TGAACTTCTC CTGGGTATCT GCGGCAGAAG GTGGAAGATT TGCTGAGTTG
GTTACTAAAG TTACCGACAG GGTAAAAGAA ATTGGTCCCA ATAACGGGAT AATGAAAAAG
CGGATTGAGG TGTAG
 
Protein sequence
MESKEFEPKI IAFLCNWCSY AGADLAGVGR IQYPPNIRVI RIPCSGRINP LFIFAGLRSG 
ADAILTSGUH PGDCHYVSGN LVARRKFALM KSLLDFMGVE EDRVNFSWVS AAEGGRFAEL
VTKVTDRVKE IGPNNGIMKK RIEV