| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0622 |
|---|
| Symbol | |
|---|
| ID | 4847302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 592513 |
|---|
| End bp | 592938 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640115304 |
|---|
| Product | methyl-viologen-reducing hydrogenase, delta subunit |
|---|
| Protein accession | YP_001046537 |
|---|
| Protein GI | 126178572 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1908] Coenzyme F420-reducing hydrogenase, delta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.316119 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACG AGAACTGGAA ACCCAAGATC ATCGCCATCA TCTGCAACTG GTGTTCCTAC
GCCGGTGCAG ACCTTGCTGG CGGCGCCCGC ATTCAGTATC CGCCCGACAT CCGCGCAGTC
CGCGTGATGT GCACGGGCAG GATCGATCCC CTCTTCATCC TGAAGGCATT CCAGGATGGG
GCGGACGGCG TGCTCGTCTC CGGCTGTCAC TTCGGCGACT GCCACTACCT TGAGGGCAAC
TTTAAGGCAG CCAAGAGGAT GTTCCTCTTG AAGAGTGTCC TCAAGAACAT CGGCCTTGAC
GACAAGCGTC TCAGAATGAC CTTCGTCTCC GCATCCGAGG GTGCGAAGTG GGGAACGGTC
ATGACGGACG TCGTCACGAC CATCAACGAG CTCGGCCCGA GCCCGCTCAA AGAGTTTGCC
AGATAA
|
|---|
| Protein sequence | MADENWKPKI IAIICNWCSY AGADLAGGAR IQYPPDIRAV RVMCTGRIDP LFILKAFQDG
ADGVLVSGCH FGDCHYLEGN FKAAKRMFLL KSVLKNIGLD DKRLRMTFVS ASEGAKWGTV
MTDVVTTINE LGPSPLKEFA R
|
|---|
| |