| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1000 |
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| Symbol | |
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| ID | 5693835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1173212 |
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| End bp | 1175548 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641263597 |
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| Product | methyl-viologen-reducing hydrogenase delta subunit |
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| Protein accession | YP_001528887 |
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| Protein GI | 158521017 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins
[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGA AATATGGTGT GTATATCTGC ACAGGGTGCG GCATAGGGGC TTCGCTGGAT
ATTGATGCGT TGTCCGAGGT CGCCAGGGAA GAAGGCTTTC CTGTCAAGAC CCATGCATTC
CTGTGCGGCA AGGAAGGCGT TGAGTTTCTC AAGGCAGACG TGGACCAGGG CATTAACTCG
CTGGCCATCG CCGCCTGTTC CAGGCGGGTA AATTTTGACG TGTTTTCCTT TGACGGCTGC
CTGGTGGACC GGGTCAACCT GCGGGAGCAG GTGGTGTGGT CCCATCCCAG GGATCAGTTT
CCGGCCCTGA CCGAAGAGGA GAAGGCCGAA GGAACCAAGT TCGACCGGGT CCAGATGATG
GCCGAGGACT CTATTCGCAT GAGCATCGCA AAGCTCAAAC AGATCAAACT GCCCGAGCCG
TACAAGCTGG ATAATTATAC TTCCGATGTG CTGGTTATCG GCGGCGGCGT CACCGGCATG
GCCGCGGCCC TGGATGTGGC AAAGGCCGGT TACAAGGCGA CCATTATTGA AAAAAGCGGC
GCGCTGGGCG GTTTTGCCGC GCAGATGCGC ATGCAGTCTC CGGTTGCAAG CCCCTATGAG
GACCTGCGTA CCCCGGTGGT GGCTGACCTG GTCAAGGCGG TGGAGGCCAA TGCCAACATC
AGCGTAAAGA CCGGTACAGT GGTGGCCCGC ATCGCGGGTC AGCCCGGCGA TTTTACCGTT
ACCCTGAAAA ATCCGGGTGA AAAGCATCCC TTTGACGTTC CCTATCCCCT TCCCGATGAG
ATGAAGGTGG ATGAGAGCGG AAAGGAGTTG AACGCCGAGC AGCAGTTTGA GGTTTACAAA
AAATATAATG AAGGCAAGGA GGATGTTCTC AAGTTTGATC CCGAGGGGTT GAAGTTCGGC
TCGGTGATCC TGGCTGCCGG CTGGCGGCCC GCCAAGCTGG AGGGCGAGTC TTTTGCCCAC
CTGGGCATCG GCCAGATTCC CGATGTGGTG ACCAACACCG AGTTTGAACA GATCGCGGCC
AAGGGCAAGA TCGTCCGGCC TTCCGACGGC AAGGAGGCCA AGTCCGTGGT CTTTATCCAG
AGCCCGGGCA AGGGCGAGGA TGACGGTGAT TTTTCCTACT GCGGATCGGT GACCAGCATC
GCCACCCTGA AACAGGCCAA GTACGTGCGT GACGACTATA GCGACGGCAA GGCCTATATT
GTCTATCAGC ACATGCGAAC CCCCGGCCTG GCCGAGAATT TTTACAAGAG CATGCAGCAG
GACCCCGGTA TCTTTATGAC CAAGGGGGAG GTGATCGGCG TTTCCAGGAA CGGCAGCGGC
CTGATGGTGG AGGCCGACAA CACCCTGCTG GGCGAAAAAC TGAAGATTCG GGCCGACATG
GTGGTGCTGG CCGCCGGCAT GGTGCCTGCC ACCGCCGATG ACCCGGTGGT CAACCTGGCC
TACCGCCAGG GCCCCGGCTT CAGGGACAAC GACATATTCG ACAAATACGC GGACTCCAAC
TTCATCTGCT TTCCCTACGA GACCCAGCGG ACCGGCGTCT ATGCCGCCGG CTCCATTCGG
CGCGCCATGA CCATTGAAGA GTCCATGGAA GACGCCACCG GCGCGGCCCT CAAGGCGATT
CAGTGCGTTG AGTCTTCCAA CCGGGGCGTG TCCGTGCATC CCCGGTCCGG CGATATGACC
TTTCCGGACT TCTTCTTCCA GCGCTGCACC CAGTGCAAAC GGTGCACGGA AGAGTGCCCC
TTCGGCGCCC TGGATGATGA CGAGAAGGGA ACGCCCAAGC CCAACCCCAC CCGGTGCCGC
CGGTGTGGAA CCTGTATGGG GGCCTGTCCG GAGCGGATCA TCGGTTTTGC CGATTATAAC
ATCAACAGCA TCGGCAGCAT GGTCAAGTCG ATTCAGGTGC CTTCCGAGGA CGATTACGAA
GAGCCGCCCC TGCGGATTCT TGCTCTGGTG TGCGAGAACG ATGCCTACCC GGCCATTGAT
GTCGCCGGCA TGAACCGGCT CTCTTTTTCC GCTGACGTGC GGATCATTCC GGTGCGGTGC
CTGGGGTCGG TCAACGTGAT CTGGATCAAG GACGCCCTTT CCCAGGGCAT GGACGGCGCC
ATCCTGCTGG GATGCAAGCA CGGGGACGAC TACCAGTGCC ATTTTGTCAA GGGCTCTGAG
CTGGCCAGCA TCCGTATGAC AAAGATCGGC GACGCGCTCA AGTCCCTCTC CCTGGAGCAG
GAGCGGGTCA CCCAGAAAGA GGTGGCCATC GACGACTATC TCAAGATTCC GGAGATCATC
AACTCCTTTG TGGAAGAGAT CGAGGCCCTG GGTCCCAACC CCTTTAAAGG TTTCTAA
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| Protein sequence | MDKKYGVYIC TGCGIGASLD IDALSEVARE EGFPVKTHAF LCGKEGVEFL KADVDQGINS
LAIAACSRRV NFDVFSFDGC LVDRVNLREQ VVWSHPRDQF PALTEEEKAE GTKFDRVQMM
AEDSIRMSIA KLKQIKLPEP YKLDNYTSDV LVIGGGVTGM AAALDVAKAG YKATIIEKSG
ALGGFAAQMR MQSPVASPYE DLRTPVVADL VKAVEANANI SVKTGTVVAR IAGQPGDFTV
TLKNPGEKHP FDVPYPLPDE MKVDESGKEL NAEQQFEVYK KYNEGKEDVL KFDPEGLKFG
SVILAAGWRP AKLEGESFAH LGIGQIPDVV TNTEFEQIAA KGKIVRPSDG KEAKSVVFIQ
SPGKGEDDGD FSYCGSVTSI ATLKQAKYVR DDYSDGKAYI VYQHMRTPGL AENFYKSMQQ
DPGIFMTKGE VIGVSRNGSG LMVEADNTLL GEKLKIRADM VVLAAGMVPA TADDPVVNLA
YRQGPGFRDN DIFDKYADSN FICFPYETQR TGVYAAGSIR RAMTIEESME DATGAALKAI
QCVESSNRGV SVHPRSGDMT FPDFFFQRCT QCKRCTEECP FGALDDDEKG TPKPNPTRCR
RCGTCMGACP ERIIGFADYN INSIGSMVKS IQVPSEDDYE EPPLRILALV CENDAYPAID
VAGMNRLSFS ADVRIIPVRC LGSVNVIWIK DALSQGMDGA ILLGCKHGDD YQCHFVKGSE
LASIRMTKIG DALKSLSLEQ ERVTQKEVAI DDYLKIPEII NSFVEEIEAL GPNPFKGF
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