Gene Shel_17780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17780 
Symbol 
ID8395668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2010089 
End bp2010610 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content62% 
IMG OID644986532 
Productcoenzyme F420-reducing hydrogenase, delta subunit 
Protein accessionYP_003144146 
Protein GI257064474 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAGAGA ACAGCAATGC TGCCCGGATT CCCGAGGATT GGGAGCCGAA GATCGTGGCG 
TTTTGCTGCC ATTGGTGCAC CTACACCGGT GCCGACCTGG CGGGATTGAA CCGCATGAAC
TACCCAGCCA ATGTGCGCGT GCTGCGCATC CCCTGCTCGG GCCGCATGAA TCCGCAATAC
GCCATCGAAG CCATCAACAA GGGGTGCGAC GGTGTGCTGG TGTGCGGCTG CCATCCCGGC
GACTGCCACT ATGCGACCGG CAACTACTTC GCCCGTCGAC GCATGATGGT GTTCAAGCGC
CTGTTGGAAT ACGAGGGGCT TGAACCCGAA CGCTTCCAGG TGCGCTGGAT TTCCGGCGCC
GAAGCCGGCA AGTTCCGCGA CACCGTCATG GAAACGGTCG AACAGGTGCG CGCCTTGGGC
CCGCTGAACC TGACCCGCGA GATTCCCGCC TTGGAATTCC CGCCCATGCC CGATGACGAC
GACGGAGCCT TCGATGCGGT GCCTGAGGAG GTGACGCAGT AA
 
Protein sequence
MVENSNAARI PEDWEPKIVA FCCHWCTYTG ADLAGLNRMN YPANVRVLRI PCSGRMNPQY 
AIEAINKGCD GVLVCGCHPG DCHYATGNYF ARRRMMVFKR LLEYEGLEPE RFQVRWISGA
EAGKFRDTVM ETVEQVRALG PLNLTREIPA LEFPPMPDDD DGAFDAVPEE VTQ