Gene Cag_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1030 
Symbol 
ID3747758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand+ 
Start bp1400408 
End bp1400857 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID637773559 
Producthydrogenase, methyl-violgen-reducing type, delta subunit 
Protein accessionYP_379335 
Protein GI78188997 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.485491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC CATTTGAACC AAAAATTGTG GCGTTTGTGT GCACCTATTG CACCTACGCA 
GGCGCCGATC TTGCAGGTAC CAGCCGTTTA AAGTATGCCC CAAACGTCCG CCTTATTCGC 
CTCCCTTGTA CCGGGCGCAT TAGTCCGCTC TTTATTTTAA AAGCGTTGCA AAAAGGAGCC 
GATGGCGTTT TAGTAAGCGG TTGCCATCCC GGCGACTGCC ACTTTAACCA AGGCAACTAC 
CACGCTCGCC GCCGTTGGAC GGTCTTTCGT TCGCTGCTTG CTTTTAGCGG TATTCCCGAA 
GAGCGCATTA AATTTTCATG GATTAGCGCT GCCGAAGGTG GCAAATTTGC AGAGCTCATT 
AACACCATTA CAGAAGATAT TCGCAAACAA GGTCCTTTTG AGCAATACAA ATCCCTTATT 
AGCGAAACTG AAGCTTCCGC GACACTTTAA
 
Protein sequence
MSEPFEPKIV AFVCTYCTYA GADLAGTSRL KYAPNVRLIR LPCTGRISPL FILKALQKGA 
DGVLVSGCHP GDCHFNQGNY HARRRWTVFR SLLAFSGIPE ERIKFSWISA AEGGKFAELI 
NTITEDIRKQ GPFEQYKSLI SETEASATL