Gene Sfum_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3535 
Symbol 
ID4458166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4325798 
End bp4326256 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content63% 
IMG OID639704306 
Productmethyl-viologen-reducing hydrogenase, delta subunit 
Protein accessionYP_847640 
Protein GI116750953 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTTG AACCCCGCAT TCTGGTATTT GCGTGCAATT GGTGCGCATA TGCCGCCGCG 
GATCTGGCCG GTACCGCGCG CATTCAATAT CCGACCACGG TCCGGCTGGT GCGGGTGATG
TGCTCCGGGA TGGTGCACCC CGACCTGATT GCCGAAGCCT TCCAGTATGG AGCGGACGGG
GTGTTGCTCA TGGGGTGCCA CCTCGGCGAA TGCCACTACC AGGACGGCAA CCAGAAAGCC
AAGGCGAGAA TGGCCGTGGT CGAAGAGCTT CTCGAGCTGC TCGGGCTCGA ACCCGACCGG
TTTCGACTGG TGTGGTGTTC CTCGGCTGAA GCGGACCGGT TCGTCAACAT CGTTCGCGAC
ATGACCCAGA CCGTCAGAAA CTTCGGGCCG TCGCCGTACC GCAGAGATCC GCCCGGGCGC
GCGGCGGGTC GGGAGGTGTT GGAATGCCAG TCACCGTAG
 
Protein sequence
MTFEPRILVF ACNWCAYAAA DLAGTARIQY PTTVRLVRVM CSGMVHPDLI AEAFQYGADG 
VLLMGCHLGE CHYQDGNQKA KARMAVVEEL LELLGLEPDR FRLVWCSSAE ADRFVNIVRD
MTQTVRNFGP SPYRRDPPGR AAGREVLECQ SP