Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3014 |
Symbol | |
ID | 4458669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3719683 |
End bp | 3720441 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639703786 |
Product | methyl-viologen-reducing hydrogenase, delta subunit |
Protein accession | YP_847123 |
Protein GI | 116750436 |
COG category | [C] Energy production and conversion |
COG ID | [COG1908] Coenzyme F420-reducing hydrogenase, delta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.123543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.362097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATT CTTTCGAACC CAAGATCCTG GCTTTTCTAT GCAACTGGTG TTCTTACGCC GGAGCGGACC TGGCAGGCGT TTCCCGTTTT CAGTATCCAC CGACCATTCG CGTGGTGCGC ACCATGTGTT CGGGCCGGGT GGATCCCGTT TTCATCGTGG AGGGTCTCCG GAGCGGATTT GACGCTGTGG CCGTGTTCGG GTGCCACATC GGGGACTGCC ATTATCTCGA CGGGAACCTT TTCACGGAAC AGCGCATGGC AATGATTCGG GAGTTGTTTG AGCTCTCCGG GATCGGTGCT GAGCGGGCCC AGTTGAGGTG GGTGAGCGCC GCTGAAGGCC AGCAGTTCGC TCAGTTTGTG AAGGAGTTGA GCGATCTGAC GCGGACGCTC GGCCCCTTCG ACGCCAAACG GCAGGCGCTG GTCCTCTCAG CCCTGGAAGG TGCCCTCGCG GCTCCCCGCT TGAGGTGGCT CCTCGGTATG GAGCGGCCGC TCACCGAAGG GAAGAATGTT TACGGCGAAG CTCTCGACTT GGGAGAATAC CGACAGGTGA AGGCAACGGC GGTCCGCGAG GAATATCGGA AAGCTCTCAT CCTGGAATGC CTCCGCGAGG GTCCGCTTTC CGTTCGCCAG ATCGCCGCCA GGAGCGGGCT GGGAGTCTAC GAAATATCCT TGCTCCTGAG CGAGGTGGAG CGGGCGGGGT TGGTGGACCT GCATCATTAC GAGGGGACAA CCCCCCAATT TGTGCGCCTT GGTTTGTAA
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Protein sequence | MTDSFEPKIL AFLCNWCSYA GADLAGVSRF QYPPTIRVVR TMCSGRVDPV FIVEGLRSGF DAVAVFGCHI GDCHYLDGNL FTEQRMAMIR ELFELSGIGA ERAQLRWVSA AEGQQFAQFV KELSDLTRTL GPFDAKRQAL VLSALEGALA APRLRWLLGM ERPLTEGKNV YGEALDLGEY RQVKATAVRE EYRKALILEC LREGPLSVRQ IAARSGLGVY EISLLLSEVE RAGLVDLHHY EGTTPQFVRL GL
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