Gene Mlab_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0242 
Symbol 
ID4795574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp227528 
End bp227956 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content49% 
IMG OID640098888 
ProductF420-non-reducing hydrogenase subunit D 
Protein accessionYP_001029685 
Protein GI124485069 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.307195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.214233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATG AGTGGAAACC AAAGATTATC GGTATCATCT GCAACTGGTG TTCATATGCC 
GGAGCAGACG GTGCTGGATC AGCCCGTACC CAGTATCCTC CTGACATCAG AATTGTCCGT
GTCATGTGTA CTGGTCGTAT CGACACCCTG TTTGTTCTGA AAGCTTTCGC TGACGGAGCA
GACGGTGTTC TCGTGTCCGG CTGTCACTTT GGTGACTGCC ACTACCTTGC AGGAAACTTC
AAGGCAGCAA AGAGAATGTT CCTTGTAAAG AGTATTCTCA ACAACATGGG TATCGAACAC
AGGCGCTTCC GTATGACCTT CGTGTCAGCA TCGGAAGGTG CAAAGTGGGC AGTCGTAATT
ACCGACGTGA TTAATACTAT CAAAGAGATT GGTCCGAGCC CCATCGCGGA GTTTAACAAA
AGGAGCTAA
 
Protein sequence
MSDEWKPKII GIICNWCSYA GADGAGSART QYPPDIRIVR VMCTGRIDTL FVLKAFADGA 
DGVLVSGCHF GDCHYLAGNF KAAKRMFLVK SILNNMGIEH RRFRMTFVSA SEGAKWAVVI
TDVINTIKEI GPSPIAEFNK RS