Gene Dret_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0195 
Symbol 
ID8417999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp246440 
End bp246886 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content61% 
IMG OID645036760 
Productmethyl-viologen-reducing hydrogenase delta subunit 
Protein accessionYP_003197075 
Protein GI258404333 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCCC AAGATGGAAA CAAGCTCCGC ATAGTGGGCT TTCTGTGTAA TTGGTGTTCG 
TACGGCGGGG CGGACACCGC CGGTGTCTCG CGCTTCGAAC AGCCGATGGA TTTGCGCATT
GTGCGGCTGC CCTGCACCGG GCGCGCCAAC CCGCTTTTTA TCATGAAGGC CTTTTTTGGC
GGGGCGGACG GTGTGCTCGT TTCAGGCTGC CACCCTCGGG ACTGCCACTA TTCTGAGGGC
AATTACTACG CCCGCCGGAG GCTGGAGCTG CTCAAACGGA CCTTGCCGGT GCTGGGCATC
GATCCGGAAC GATTTGAGTA CACCTGGGTC TCCGCCTCTG AGGGCAAACG GTGGCAGACC
GTCGTTACCC GCTTTACCGA GCGCATCCAC ACCCTGGGAC CGGCCCCGGC CATTGAAAAG
CAATGCGCTC CGGCCCTTCA AGCCTAG
 
Protein sequence
MSAQDGNKLR IVGFLCNWCS YGGADTAGVS RFEQPMDLRI VRLPCTGRAN PLFIMKAFFG 
GADGVLVSGC HPRDCHYSEG NYYARRRLEL LKRTLPVLGI DPERFEYTWV SASEGKRWQT
VVTRFTERIH TLGPAPAIEK QCAPALQA