Gene Sfum_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0823 
Symbol 
ID4460770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1018333 
End bp1018755 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content58% 
IMG OID639701585 
Productmethyl-viologen-reducing hydrogenase, delta subunit 
Protein accessionYP_844955 
Protein GI116748268 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.400566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGACC GTGAACCGAC GATCATCGCC TTCGTGTGTA ACTGGTGCAC TTACACGGCC 
GCCGACCTGG CGGGCACTTC GAGGCTGGTT CAGCCTCCGA ACGTGCGCAT GATCAGAATG
ATGTGCACCG GGATGATCGA TACGAAGTAC GTCATCAAGG CCCTTCTCGA AGGCGCCGAC
GCAGTGCTCA TCAGCGGTTG CCACCCGGGC GACTGCCATT ACATCAACGG GAATCTGAAG
GCCCGGCGCA GGGTCAGGCT CCTGAAGGAG ATCCTGCCCC GGTTCGGAAT AGACGAGCGC
AGGCTCAAGA TGACCTGGAT CGGGGCAAGC GAGGGCATTG ATTTCGCCAA CACCGTCAAA
GAGCTCGTTG CCGAAATCAA ACAGCTGGGT CTCAACGATC TGAGACAAAA GATGATTCTG
TGA
 
Protein sequence
MGDREPTIIA FVCNWCTYTA ADLAGTSRLV QPPNVRMIRM MCTGMIDTKY VIKALLEGAD 
AVLISGCHPG DCHYINGNLK ARRRVRLLKE ILPRFGIDER RLKMTWIGAS EGIDFANTVK
ELVAEIKQLG LNDLRQKMIL